Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1538 ATGGAGGGTGGAGGGAGTTTTAGGATTGGAAGTTCTTCGATATGGAGGAGTAGTGATGCTGACGAGATATTCTCGAGCTCGTTCCGGCAGGAGGACGACGAGGAAGCTCTCAAGTGGGCGGCAATTGAGAGACTTCCGACTGTTGTGCGTCTGAGGAAAGGGTTGCTGGCCTCGCCGGACGGTGGAGGAGTTAGTGAGATTGACATAAAGAAGCTTGGGTTGCAAGAAAAGAGAGAACTCCTTGAGAGGCTAGTGAGGATTGCTGAAGAGGATAATGAGAAGTTCTTGCTCAAGCTCAGGGATCGTATTGATCGAGTTGGAATTGATCTTCCTACAATAGAGGTCCGATTTGAGCACATGAACATTGAAGCAGAAGTTCATGTAGGAACCAGAGCTTTGCCCACCTTCACTAACTTCATGGTCAATATAGTTGACGGACTGTTGAACACTCTTCATGTACTTCCAAGTAGAAGAGAACACATAAATATACTCCAGGATGTTAGTGGAATAATAAAGCCTGCCAGAATGACATTGCTTTTGGGCCCACCAAGTTCTGGAAAAACCACACTCCTGTTGGCTCTGGCAGGAAAACTTGATCCAAAATTAAAGTTCAATGGAAAGGTGACCTATAATGGACATGGGATGAATGAGTTTGTGCCCCAAAGAACTGCTGCATATGTGAGTCAAAATGATCTTCATATTGGAGAAATGACTGTCAGAGAAACACTAGCTTTCTCTGCAAGATGCCAAGGAGTTGGACCTCGTTATGACCTGCTAGCAGAATTGTCAAGAAGAGAAAAAGAGGCCAATATCAAGCCTGATCCAGATATTGATGTCTACATGAAGGCTGTAGCAACTGAAGGCCAGAAAGCAAATTTCATTACAGATTATGTCCTAAGGATTCTGGGATTGGAGGTATGTGCTGATACTGTGGTAGGAAATGCAATGTTAAGAGGTATCTCTGGTGGACAAAGGAAACGTGTTACAACAGGGGAGATGCTGGTAGGACCAGCTAAAGCTCTTTTCATGGATGAAATCTCCACTGGTTTGGACAGTTCAACAACTTTCCAAATTGTGAATTCACTCAAGCAATATGTTCACATTCTCAAGGGAACCGCCGTCATCTCGCTCCTGCAGCCAGCACCAGAGACTTACAATCTCTTTGATGACATTATTCTACTCTCTGATAGCCACATTGTGTACCAAGGTCCCCGTGAAAATGTGCTCGAGTTTTTCGAATCCATGGGGTTTAAATGTCCTGAGAGGAAAGGTGTGGCAGACTTTTTGCAAGAGGTTACATCAAGGAAAGATCAAGAACAATATTGGGTTCACAAAGATCAGCCATATAGATTTGTCACATCCAAAGAGTTTGCTGATGCATTTCAATCATTTCATGTTGGGAGAAGACTTGGTGATGAACTTAGTACTGAGTTTGACAAGTCTAAGAGCCACCCTGCTGCTTTGACAACCAAAAAATATGGAGTTGGAAAATGGGAACTCCTAAAAGCTTGCTTAGCAAGAGAATATTTACTTATGAAGCGCAATTCATTCGTCTACACCTTCAAGCTTTGCCAACTTGCTGTAATGGCAATCATTGCAATGACAATCTTCCTCCGAACGGAGATGCACCGAGATTCAGTGACACATGGTGGTATATATACAGGTGCATTGTTCTACAGTGTTGTGGTGATTATGTTCAATGGTCTGGCTGAGCTTTCTATGGTAGTTTCAAGGCTTCCTGTTTTCTACAAGCAAAGGGAACATCTTTTCTTCCCTTCATGGGCATTTGCTCTTCCTGCATGGATCCTCAAAATCCCAATGACTTTTGTGGAAGTTGGAGTCTGGGTCTTCCTAACCTACTATGTCATTGGTTTTGATCCAGATGTTGGAAGATTTTTTAGGCAATACCTTCTTCTTGTACTAGTAAACCAGATGGCTTCTTCGTTGTTTCGATTTATTGCAGCAGTAGGTAGAGAAATGACAGTGGCTCTAACATTTGGATCATTTGCTTTAGCAATCCTTTTTGCCATGAGTGGTTTCGTCTTGTCGAAAGAAAACATCAAAAAATGGTGGCTTTGGGGATTTTGGATGTCACCTATGATGTATGGACAAAATGGGATAGCAAACAATGAGTTCCTGGGGAAGAGATGGGGACATGTTCTACCTGGTTCAAATGAAACTCTAGGAATTCAAGTTTTGAAGTCGCGCGGATTTTTTACTCAGTCTTACTGGTATTGGATAGCTGTTGGAGCTTTGATTGGATACACCTTAATCTTTAACTTTGGTTACATTCTCGCTCTCACTTACTTGGATCCACTTGGGAAGCATCAGTCTGTAAAATCAGAAGAAAGTAAAAGCAATGAAGAAAATGATGGTAGTAAAAAAGGAACTAATGCTTTGAAGTTCTTGAGACATAGCTTTTCTCATCACTCAAATAGAGTGGTAAACGGAGAGAGTGTAAGTGGAAGCATTACTCCTCATAATAGAAGAGGAATGGTTCTTCCTTTTGAGCCACATTCCATCACCTTTGATGAAGTAACATATGCTGTTGACATGCCACAGGCAATGAAGGATCGCGGCGTTGTTGAGGATAGGTTGGTTCTTTTGAAGGGTGTTAGTGGAGCTTTTAGGCCAGGTGTTCTCACTGCTCTAATGGGAGTCACTGGTGCTGGAAAAACAACTCTGATGGATGTACTTGCTGGTAGAAAAACTGGAGGTTATATTGGAGGGAACATCACAGTTTCAGGGTATCCAAAGAAGCAAGAAACATTTGCAAGGATTTCCGGATACTGCGAGCAAAACGATATCCACTCTCCTAATGTAACTGTATATGAATCCTTGCTCTATTCAGCATGGCTTAGATTGTCCCCAGATATTGATGCTAAAACCAGAAAGATGTTCATTGAGGAAGTGATGGAACTTGTGGAGTTGAAACCACTAAGGCATGCTTTGGTTGGATTGCCTGGTATTAGTGGTTTGTCCACAGAACAACGGAAAAGGTTGACGATTGCGGTTGAGTTGGTGGCGAATCCTTCTATAATATTCATGGATGAGCCAACTTCAGGTCTGGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTTAGGAACACAGTTGACACAGGAAGAACTGTTGTCTGTACCATTCATCAGCCTAGCATTGATATTTTTGAATCTTTTGATGAGCTTCTGCTAATGAAGCAAGGTGGACAAGAGATATATGTTGGACCACTTGGGCATCATTCTTCCACTTTAATTAGCTACTTTGAGGGAATCCAAGGTGTTAATAAGATTAAAGAGGGCTACAATCCAGCAACATGGATGCTAGAAGTCACAAATTCAGCTAAAGAACATGAATTGGAGATCGATTTCTCTGAGGTGTATAAAAAATCAGATTTATACAGGAGAAACAAAGAACTTATTAAAGAATTGAGTACTCCGGCTCCTGGTTCCAAAGACCTTTATTTTCCTACCCAATTCTCAAGGTCCTTTTTCACACAATGCTTGGCTTGCTTGTGGAAACAACATTGGTCTTACTGGCGCAATCCGCTGTACACTGCCATAAGATTTCTTTACTCAACCGCAGTGGCTTTAGTGCTTGGAAGCATGTTTTGGGACCTTGGCTCCACAATTAAAAAGCAACAAGATCTTTCCAATGCCATGGGCTCCATGTATGCTGCTGTTCTCCTTATTGGTATTAAGAATGCTAATGCCGTGCAGCCGGTAGTTGCAGTCGAGAGAACAGTCTTTTATAGAGAAAGAGCAGCCGGAATGTATTCAGCTTTGCCGTATGCTTTTGCTCAGGTTCTAATTGAGGTCCCATATGTTCTTTCACAGGCATTGGTGTATGGCATTATAGTTTATGCAATGATTGGTTTTGAGTGGACAGTCACTAAGGTTTTCTGGTACTTATTCTTCATGTATTTCACCTTCTTGTACTTCACTTACTATGGCATGATGTCGGTTGCTATGACTCCAAATCAACACATCTCTACTATAGTTGCTTCTGCTTTCTACTCAGTGTGGAATCTCTTCTCAGGATTCATAATCCCAAGACCAAGTATTCCAATATGGTGGAGATGGTACTATTGGTTAAATCCAGTGGCTTGGAGTTTGTATGGTTTGGTGGCATCACAATATGGAGATTTGCAGGGAAGCATTGAATCCAACGATGGAAGTAAACCAAAAATTGAAGACTTTTTGAGACATTACTTTGGCTTCAGGCATGATTTCTTGGGAGTGGTTGCAGCTGTGGTTGTTGGATTTGGAGCACTTTTTGCATTCTCATTTGCTATATCAGTTAAGACATTTAACTTCCAAAGGCGCTAA 4329 0.4186 MEGGGSFRIGSSSIWRSSDADEIFSSSFRQEDDEEALKWAAIERLPTVVRLRKGLLASPDGGGVSEIDIKKLGLQEKRELLERLVRIAEEDNEKFLLKLRDRIDRVGIDLPTIEVRFEHMNIEAEVHVGTRALPTFTNFMVNIVDGLLNTLHVLPSRREHINILQDVSGIIKPARMTLLLGPPSSGKTTLLLALAGKLDPKLKFNGKVTYNGHGMNEFVPQRTAAYVSQNDLHIGEMTVRETLAFSARCQGVGPRYDLLAELSRREKEANIKPDPDIDVYMKAVATEGQKANFITDYVLRILGLEVCADTVVGNAMLRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVNSLKQYVHILKGTAVISLLQPAPETYNLFDDIILLSDSHIVYQGPRENVLEFFESMGFKCPERKGVADFLQEVTSRKDQEQYWVHKDQPYRFVTSKEFADAFQSFHVGRRLGDELSTEFDKSKSHPAALTTKKYGVGKWELLKACLAREYLLMKRNSFVYTFKLCQLAVMAIIAMTIFLRTEMHRDSVTHGGIYTGALFYSVVVIMFNGLAELSMVVSRLPVFYKQREHLFFPSWAFALPAWILKIPMTFVEVGVWVFLTYYVIGFDPDVGRFFRQYLLLVLVNQMASSLFRFIAAVGREMTVALTFGSFALAILFAMSGFVLSKENIKKWWLWGFWMSPMMYGQNGIANNEFLGKRWGHVLPGSNETLGIQVLKSRGFFTQSYWYWIAVGALIGYTLIFNFGYILALTYLDPLGKHQSVKSEESKSNEENDGSKKGTNALKFLRHSFSHHSNRVVNGESVSGSITPHNRRGMVLPFEPHSITFDEVTYAVDMPQAMKDRGVVEDRLVLLKGVSGAFRPGVLTALMGVTGAGKTTLMDVLAGRKTGGYIGGNITVSGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLSPDIDAKTRKMFIEEVMELVELKPLRHALVGLPGISGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKQGGQEIYVGPLGHHSSTLISYFEGIQGVNKIKEGYNPATWMLEVTNSAKEHELEIDFSEVYKKSDLYRRNKELIKELSTPAPGSKDLYFPTQFSRSFFTQCLACLWKQHWSYWRNPLYTAIRFLYSTAVALVLGSMFWDLGSTIKKQQDLSNAMGSMYAAVLLIGIKNANAVQPVVAVERTVFYRERAAGMYSALPYAFAQVLIEVPYVLSQALVYGIIVYAMIGFEWTVTKVFWYLFFMYFTFLYFTYYGMMSVAMTPNQHISTIVASAFYSVWNLFSGFIIPRPSIPIWWRWYYWLNPVAWSLYGLVASQYGDLQGSIESNDGSKPKIEDFLRHYFGFRHDFLGVVAAVVVGFGALFAFSFAISVKTFNFQRR* 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1538 1442 Gene3D - 842 1084 IPR027417 -
Amo16g1538 1442 Gene3D - 150 460 IPR027417 -
Amo16g1538 1442 Pfam Plant PDR ABC transporter associated 717 779 IPR013581 -
Amo16g1538 1442 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 1 1442 - -
Amo16g1538 1442 Pfam ABC-2 type transporter 500 712 IPR013525 GO:0016020|GO:0140359
Amo16g1538 1442 Pfam ABC-2 type transporter 1166 1380 IPR013525 GO:0016020|GO:0140359
Amo16g1538 1442 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 841 1093 IPR003439 GO:0005524
Amo16g1538 1442 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 148 421 IPR003439 GO:0005524
Amo16g1538 1442 CDD ABCG_PDR_domain2 838 1076 IPR034003 -
Amo16g1538 1442 Pfam ABC-transporter N-terminal 88 139 IPR029481 -
Amo16g1538 1442 CDD ABCG_PDR_domain1 146 403 IPR034001 -
Amo16g1538 1442 Pfam ABC-2 type transporter 379 457 IPR043926 GO:0140359
Amo16g1538 1442 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 1442 - -
Amo16g1538 1442 Coils Coil 71 94 - -
Amo16g1538 1442 Pfam ABC transporter 869 1021 IPR003439 GO:0005524
Amo16g1538 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 421 IPR027417 -
Amo16g1538 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 863 1076 IPR027417 -
Amo16g1538 1442 Pfam ABC transporter 164 346 IPR003439 GO:0005524
Amo16g1538 1442 SMART AAA_5 173 398 IPR003593 -
Amo16g1538 1442 SMART AAA_5 878 1070 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1538 Amo-Chr16 28427778 28436262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1538 K08711 - gmx:732607 2468.34