Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1487 ATGAACATCTTCTCCAAGAAACCCACTGCTAAAGAGGCTCTTCGCGAGAGTAAACGCGAAATGACAACTGCTACCAGAGGTATAGAGAGGGAAATTGGAGCATTACAATTGGAAGAAAAGAAGCTTCTTGCTGAGATAAAGAGAACTGCTAAGACGGGAAACGAGGCAGCAGATTGCAACCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATAGCAACTCACACACAGGCTATGCATGCCCATTCTTCTGTTGCTGCTGGTATGCAAGGAGCTAGTAAGGCAATGGCAGCTATGAATAAGCAAATGGCACCAGCCAAGCAAGCCAAAGTTATACAAGACTTCCAGAGACAATCAGCGCAGATGGATATGACTACTGAGATGATGTCTGATACCATAGATGATGCATTGGATAATGATGAAGCCGAAGAGGAGACTGAAGATTTGACAAACCAGGTCCTTGACGAAATTGGAGTGGATGTTGCATCACAGTTATCAGCAGCTCCCAAAGGGAGAGTCCGAACAAAGAACACAGAAAATGTCAGCAGCTCGGGCATCGATGACCTTGAGAAGCGTTTGGCAGCTCTTAGAAACCCATAA 597 0.4573 MNIFSKKPTAKEALRESKREMTTATRGIEREIGALQLEEKKLLAEIKRTAKTGNEAADCNLQGSRAQMRGIATHTQAMHAHSSVAAGMQGASKAMAAMNKQMAPAKQAKVIQDFQRQSAQMDMTTEMMSDTIDDALDNDEAEEETEDLTNQVLDEIGVDVASQLSAAPKGRVRTKNTENVSSSGIDDLEKRLAALRNP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1487 198 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 198 IPR005024 GO:0007034
Amo16g1487 198 MobiDBLite consensus disorder prediction 169 183 - -
Amo16g1487 198 MobiDBLite consensus disorder prediction 9 23 - -
Amo16g1487 198 Pfam Snf7 16 171 IPR005024 GO:0007034
Amo16g1487 198 MobiDBLite consensus disorder prediction 162 198 - -
Amo16g1487 198 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 198 - -
Amo16g1487 198 Gene3D - 4 58 - -
Amo16g1487 198 Gene3D - 59 167 - -
Amo16g1487 198 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1487 Amo-Chr16 27261388 27264247 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1487 K12192 - gmx:100306343 311.997