Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1227 ATGACCATGGCACTCGTTATCCATTCCTCTGAAATGTTCATTGCCCCAAAATTTCCGTGTAATCCGAATCCAAACCCTATCAAATTCCACAGCTTTAAGCCCGTGGCAGTTGGGTCAAGTGCAAGAGGATTAAAAGCTTTTTGTCAAGTGAAGGATTGTGCGGTTTTGGAATTGGAACAGAATTTGAGGTTGTACGGTGAGTTCTCGGGTGCTGTGAAGTTGGGGAGGAAAGAAGAAGAGGAGGAAAAGCAGAAGTACTACGTGAATATGGGATATGCCATCCGAACTCTGAGGGAAGATTTTCCCCAAATCTTCTTCAAGGAACCTAGCTTCGATGTCTACAGGGATGATATTGTATTTAAAGATCCTTTGAATACCTTTGTTGGCATCCAGAAATACAAATCGCTGTTGTGGGCATTACGATTTCATGGCAGAATATTTTTCCGAGCTTTGTCGATTGACGTAACAAGTGTGTGGCAGCCTGTTGAGAGTGTGATCATGGTTCGGTGGAGTGTTCACGGGATTCTGCGAATTCCATGGGAGAGTCGTGGTAGGTTTGATGGGACCTCTGAGTACAAACTTGACAGGAAAGGCAAGATTTATGAGCACCGGGTTGACAACATTGCTCCAAATACACCTCATCATAAATTTGGAGTGCTAAGAGTGGAAGAATTGATTCAATCTATTGGCTGCCCCTCCACCCCAAAACCAACCTATTTTGAAACATCGTCATCTACAAATAGAACTTGA 750 0.4347 MTMALVIHSSEMFIAPKFPCNPNPNPIKFHSFKPVAVGSSARGLKAFCQVKDCAVLELEQNLRLYGEFSGAVKLGRKEEEEEKQKYYVNMGYAIRTLREDFPQIFFKEPSFDVYRDDIVFKDPLNTFVGIQKYKSLLWALRFHGRIFFRALSIDVTSVWQPVESVIMVRWSVHGILRIPWESRGRFDGTSEYKLDRKGKIYEHRVDNIAPNTPHHKFGVLRVEELIQSIGCPSTPKPTYFETSSSTNRT* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1227 249 Pfam Uncharacterized conserved protein (DUF2358) 93 203 IPR018790 -
Amo16g1227 249 PANTHER RIKEN CDNA 2310061I04 GENE 40 248 IPR018790 -
Amo16g1227 249 SUPERFAMILY NTF2-like 111 205 IPR032710 -
Amo16g1227 249 PANTHER - 40 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1227 Amo-Chr16 20941698 20943425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1227 - - gmx:100792423 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1227 16 20941698 20943425 Amo02g0304 02 3816581 3818970 PCT
Amo02g0304 02 3816581 3818970 Amo16g1227 16 20941698 20943425 PCT