Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0891 ATGAGTTTGAAGGCGAAAATGTTCGGAGCCTTGAGCGACGATATAATCCTCAAGATCTTCCACACTCTGGAAGATGACCCTCGCCACTGGGCAACACTCGCTTGCGTATGCACCAGATTCTGCTCCCTCATCCACACCTCCTGCTGCAAGTCCCTCTGCCACCGCACTATCCCCTCCGATCTCCTCCCCTCTTCATCCACTTCCACCGCCGCAGATTGGGCCTTTCTCCACAAGCTCTCCGTCTGCTGCCCCGGTCCCATCCACGCTGGCCTCCTCCTCGAAACCTCCGACTTCGGCCTCCAACGGGAGCTCGGCCCAGACCTCCCCATCACCCTCGCCACAGCACCCGCCGCCCCTCCCATTCCCTCCAACGACGTTGTTTCCTCTGACTCCTACTGGTCCCTCTACGACGACCTTTACTTCGACACCGTTTACAATCCCTCCGAGACCGAAACCGAAACCGAGTCCGCATCGCATCCTGTAGAGTCTCAGCAAGCGCCGTTATCGTCGGTGGTTGAGAAGGAGTGCAACAAGAGGAGGAAAGTGTGCAGGTCATCGCATCTGGCTTCAGGGACTCGGAACCTGAGCAGAGAACAGGGGAGCAAGCTTCTTGCGAGACAGTTTCGGCATGATTGGCTGTACATCTGTGAGTGGCCAGGGTGCGTGCACGTGGAGGAGAAGAGGAATTACAGGTTGTTCAGAGGCGTGTTCAAGAACTTCAAGAGGAGCAGGGTGTGGAGGACCATCAATGATGGCAACAGGAAGAGGATCGATCTTGGTTGCGCCTTCTGTAACTGTCATGAGACTTGGGATCTGTTGTCTGCGTTTTGTTTGAGGAGGGGCTTTGGCTATCACGATGATGGTCAGCCTGTTGTTCGAGCTTTTGTTTGTGAGAATGGCCATGTCTCTGGTGCTTGGACTGATGTCCCCATCTACACTTAA 942 0.5531 MSLKAKMFGALSDDIILKIFHTLEDDPRHWATLACVCTRFCSLIHTSCCKSLCHRTIPSDLLPSSSTSTAADWAFLHKLSVCCPGPIHAGLLLETSDFGLQRELGPDLPITLATAPAAPPIPSNDVVSSDSYWSLYDDLYFDTVYNPSETETETESASHPVESQQAPLSSVVEKECNKRRKVCRSSHLASGTRNLSREQGSKLLARQFRHDWLYICEWPGCVHVEEKRNYRLFRGVFKNFKRSRVWRTINDGNRKRIDLGCAFCNCHETWDLLSAFCLRRGFGYHDDGQPVVRAFVCENGHVSGAWTDVPIYT* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0891 313 PANTHER PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN 5 313 - -
Amo16g0891 313 PANTHER EID1-LIKE F-BOX PROTEIN 2-RELATED 5 313 IPR040267 -
Amo16g0891 313 SUPERFAMILY F-box domain 4 75 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0891 Amo-Chr16 14199323 14201721 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0891 - - adu:107492401 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0891 16 14199323 14201721 Amo16g0891 16 14199323 14201721 ECH