Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0879 ATGGCTTCCCAAGAACTCAAACACCGGGTCACACACGATGCAGACACCAAAGCAGGAGGAGGAACAACAACAACAACCAGACGGGACAAGAAAATGGCGATGGCCAAACGCGGTCTTAGGTCACTCCTGATTGCCGTTATTCTCCCCTTGTCGCTGACGCTCTTCTCCGCATACATATCGAGCTCCATGTCACGTGCCAACCACCACATGGATCACAAGACTCCCTTCTGGTTCCCGCCCTCGTGGGCCCTACACCTAACTTTACCCGCTTCGGGCTTCCTGATGGGCCTCTCGGCCTGGATGGTTTGGGCCGAAGGAGGATTCCATAGGTACCCCGTAGCTGTGGTGCTCTACGTGGCTCAGCTCCTCTTAACGGTTCTGTGGGACCCGCTTGTGTTCGGTGCAGGTGCTTCGAGGGTGGGCATGGTGCTGTGCCTGGGTCTGTTTGGGTGCCTGTATGGGTGCATGCGTGTGTTTAAGCAGGTCAACCATGTTGCTGCTGATTTGATAAAGCCTTGTTTGGCTTGGACCGCTTTTCTCTCCATTGTAAATCTTAAGCTCCTTTCTGCCTAA 573 0.5428 MASQELKHRVTHDADTKAGGGTTTTTRRDKKMAMAKRGLRSLLIAVILPLSLTLFSAYISSSMSRANHHMDHKTPFWFPPSWALHLTLPASGFLMGLSAWMVWAEGGFHRYPVAVVLYVAQLLLTVLWDPLVFGAGASRVGMVLCLGLFGCLYGCMRVFKQVNHVAADLIKPCLAWTAFLSIVNLKLLSA* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0879 190 Pfam TspO/MBR family 45 187 IPR004307 GO:0016021
Amo16g0879 190 Gene3D TspO/MBR protein 37 189 IPR038330 -
Amo16g0879 190 MobiDBLite consensus disorder prediction 1 30 - -
Amo16g0879 190 PIRSF PBR 31 190 IPR004307 GO:0016021
Amo16g0879 190 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 22 188 IPR004307 GO:0016021
Amo16g0879 190 MobiDBLite consensus disorder prediction 1 15 - -
Amo16g0879 190 PANTHER TSPO/MBR FAMILY PROTEIN 22 188 - -
Amo16g0879 190 CDD TSPO_MBR 42 188 IPR004307 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0879 Amo-Chr16 14083441 14084579 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0879 K05770 - gmx:100785785 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0879 16 14083441 14084579 Amo16g0879 16 14083441 14084579 ECH