Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0873 ATGAGGATAGTTGGGTTGACCGGCGGAATCGCATCTGGGAAGAGCACCGTTTCCAATCTCTTCAAGTCCCATGGGGTTCCTGTTGTTGACGCTGATGTCGTCGCTCGTGATGCTTTGAAGAAAGGTAGCGGTGGATGGAAAAAAGTTGTTGCAGCTTTTGGGGAGGAAATCCTCCTTGAAAATGGAGAAGTCAATAGACCCATGCTTGGCCAGATTGTTTTCTCCGATCCTGATAAGCGCCAATTTCTCAATCGATTACTGGCTCCCCATATATCTTCTGGAATCTTTTGGGAAGTGGTGAAGCTTTGGCTTAAGGGGTATAAGGTTATTGTTCTTGATGTCCCATTGTTGTTTGAGGCTAAGATGGACAAGTTCACAAAGCCAATTATAGTTGTGTGGGTTGATCCTGAAACACAGATAAAGAGACTCATGGGGAGAGACAAATCAAGTGAGGAGGATGCTGGGAACAGGATCAATGCTCAAATGCCACTTGATGTGAAGAGGAATAAAGCAGATATAGTGATAGATAACACTGGATCACTTGATGACTTGAATGAACAGTTTCAGAAGGTTCTGATTGAAGTGTCAAAACCCTTGACATGGACTCAGTTTTGGCTTTCAAGGAATGGAGCCTTGATCATACTTGCTTCACTCACTTCGGTTTTAAGTGGAGTCCTACACATTAGTGATGATCCATTGCTCTTTTTGCTAGATACACTACTTGGTTTCCACTCCAACCAGAACTCTCAAATGGAAGCAGCTAAGCCACCATCTGAAGAAAAAACTCATCATCCTGCAGCTGGAGAAATTCTCAAATGGGTTCTGAGAGTCTTCATCCACTGTGATGGCTGCAAAAAGAAGGTTAAGAAAGTTCTCCAGGGAATTGATGGTATCCATTATTTTTTATTCTCTTTGGAGCACAAGGTTATAGTAACCGGTAACGTGGAGGCTGATACTCTGATCAAGAGGCTTCTAAAAACAGGTAAATATGCAGAACTTTTGCCAGAAAAACAGCCACCACCTGCTGAGAAGAACCATAACAAAAAGAAGTCTGGGAAAACCAAGGGGGGTGGTGGTGGTGGTGAAGGCGATGATGTTAACAATGATGAGAAGAAGAATAATGAACCGGCTGGCGGGGATGTTGGTTCCAAAGAGGGTAGTGCTGATGGTGATGAAGGTTCAGACAAAGATGATGAATGTGATGAGGAAGAGGGTGCTACAGCTACTGCTGGTGGTGAAGGAGAAGCAAATAGTAAAGTTGATGATGGTGGTGATGCAAAATCACCAGCAGCAGCAGAAGTTGTTTCTGCAAAATCAGTTGCATCTTCTTTGCCTCATCAACAACCAGTAATTCAAAATGCATATCCATATCCATATCCTCCACCACCACAAATGTACTATTCACCACCTTCTCTACCACCAACACCAGCATATGGATTAAGCTATAACACAGCTTATCCTCTATCAAGTGCTTCATACTATGTTGGGTCTCCTATCATGCCCATGCATCATGCATATGCTACTACATACCCTCACCTCCCACCACCACCACCCTCTCATCCTATCAGCCACTATGTTGATGATGATCATCAGGATCAATATCAAGGTGGATGCTCCATCATTGCTGAATACCCTGAGGAATGGAAGAAGTTGGGGGACTTTATTTTCGTGGGAGAGAGTGAGAGACCACAAATTCAGAATCGGTACCATCAATTTGCAAATTAA 1725 0.4348 MRIVGLTGGIASGKSTVSNLFKSHGVPVVDADVVARDALKKGSGGWKKVVAAFGEEILLENGEVNRPMLGQIVFSDPDKRQFLNRLLAPHISSGIFWEVVKLWLKGYKVIVLDVPLLFEAKMDKFTKPIIVVWVDPETQIKRLMGRDKSSEEDAGNRINAQMPLDVKRNKADIVIDNTGSLDDLNEQFQKVLIEVSKPLTWTQFWLSRNGALIILASLTSVLSGVLHISDDPLLFLLDTLLGFHSNQNSQMEAAKPPSEEKTHHPAAGEILKWVLRVFIHCDGCKKKVKKVLQGIDGIHYFLFSLEHKVIVTGNVEADTLIKRLLKTGKYAELLPEKQPPPAEKNHNKKKSGKTKGGGGGGEGDDVNNDEKKNNEPAGGDVGSKEGSADGDEGSDKDDECDEEEGATATAGGEGEANSKVDDGGDAKSPAAAEVVSAKSVASSLPHQQPVIQNAYPYPYPPPPQMYYSPPSLPPTPAYGLSYNTAYPLSSASYYVGSPIMPMHHAYATTYPHLPPPPPSHPISHYVDDDHQDQYQGGCSIIAEYPEEWKKLGDFIFVGESERPQIQNRYHQFAN* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0873 574 CDD HMA 279 332 IPR006121 GO:0046872
Amo16g0873 574 PANTHER DEPHOSPHO-COA KINASE-RELATED 1 221 - -
Amo16g0873 574 ProSiteProfiles Heavy-metal-associated domain profile. 279 333 IPR006121 GO:0046872
Amo16g0873 574 ProSiteProfiles Dephospho-CoA kinase (DPCK) domain profile. 3 206 IPR001977 GO:0004140|GO:0005524|GO:0015937
Amo16g0873 574 TIGRFAM TIGR00152: dephospho-CoA kinase 3 190 IPR001977 GO:0004140|GO:0005524|GO:0015937
Amo16g0873 574 Hamap Dephospho-CoA kinase [coaE]. 1 198 IPR001977 GO:0004140|GO:0005524|GO:0015937
Amo16g0873 574 PANTHER DEPHOSPHO-COA KINASE 1 221 - -
Amo16g0873 574 MobiDBLite consensus disorder prediction 332 432 - -
Amo16g0873 574 CDD DPCK 3 183 - -
Amo16g0873 574 MobiDBLite consensus disorder prediction 364 378 - -
Amo16g0873 574 MobiDBLite consensus disorder prediction 392 408 - -
Amo16g0873 574 Gene3D - 1 201 IPR027417 -
Amo16g0873 574 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 190 IPR027417 -
Amo16g0873 574 Gene3D - 268 332 - -
Amo16g0873 574 Pfam Dephospho-CoA kinase 3 182 IPR001977 GO:0004140|GO:0005524|GO:0015937
Amo16g0873 574 SUPERFAMILY HMA, heavy metal-associated domain 275 333 IPR036163 GO:0046872
Amo16g0873 574 Pfam Heavy-metal-associated domain 274 327 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0873 Amo-Chr16 14021311 14027585 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0873 K00859 - adu:107492497 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0873 16 14021311 14027585 Amo16g0873 16 14021311 14027585 ECH