Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0854 ATGGATGTGTTGACAATGTTGACTGCTGAGAAGCCAGTGGTGATCTTCAGCAAGAGCACTTGTTGCATGAGCCACACAGTGAAGGCTCTGATAAAAAGCTTTGGTGCAAACCCTGCAATGATTGAGCTTGACAAGTTGCCAAATGGTCAGCAAGTAGAGAGAGCACTGGTCCAGCTCGGCAGCCGGCCAGGCGTGCCGGCGGTGTTCATTGGACAGCAATTCATAGGTGGTGCTGATGAACTCATAAGTCTCAATGTTCAAAACAAGCTTGCTCAATTGCTACTAAGGGCTAAAGCTATATTCATCTGGGGTAGGTAG 318 0.4811 MDVLTMLTAEKPVVIFSKSTCCMSHTVKALIKSFGANPAMIELDKLPNGQQVERALVQLGSRPGVPAVFIGQQFIGGADELISLNVQNKLAQLLLRAKAIFIWGR* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0854 105 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Amo16g0854 105 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Amo16g0854 105 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Amo16g0854 105 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 105 - -
Amo16g0854 105 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Amo16g0854 105 Pfam Glutaredoxin 13 75 IPR002109 -
Amo16g0854 105 SUPERFAMILY Thioredoxin-like 4 99 IPR036249 -
Amo16g0854 105 PANTHER GLUTAREDOXIN 1 105 IPR011905 -
Amo16g0854 105 TIGRFAM GlrX-like_plant: glutaredoxin-like family 6 101 IPR011905 -
Amo16g0854 105 Gene3D Glutaredoxin 3 102 - -
Amo16g0854 105 CDD GRX_GRXh_1_2_like 12 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0854 Amo-Chr16 13784878 13785453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0854 1 102 Miscellaneous Gene Families AT4G15690 49.020 2.50e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0854 K03676 - gmx:100803979 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0854 16 13784878 13785453 Amo06g0355 06 5010291 5010943 hybridization