Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0852 ATGTCGGACAGAGTTGGTCCAATGGAGGATAGCCAGGAAATTGAGAAGCAGGTGCAGGAAGAAGTGATTTCAGACAATGGAACTGAAAAGAAGCAGGAAACTCGTGATGAGATGCTTTCGCGGCACAGGAAAGAGATATCACAACTGCAGAAAAAAGAAATTGAAATGAAAAAGGCAGCAGCTAGAGGTAGCAAGGCTGAACAGAAAGCTAAGAAGAAACAAGTGGAGGACGAGGTTACTCGACTTTCTGCTAATCTTAAAGAGAAACATGCAAAAGAACTGGCTGAATTAGGCTATAGCAGTGGTGGTAATGGGAATGAAAAGGGAAATTTAGACAGTTTGATAAAGGCCATAGCTGGAGTATCTGTTGCCAATCAGCCTGACCGTGCAAGGGTTAGCAAGGCCCAACAGAAGCGTGACCGAAGAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATCCAAGCAGAGCAGAGTGACACTATAAGTGATCGTACAATTGAAAATGAAAAATTGGAAAAGAAGTTGAAGCCTCTCGGTTTAACTGTGTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCTGTTGAGGATCAGCTGGCCCTCCTCTCTGGCGGTAGATCACCTCATACATACCAAGAACTTCGAGAAATGGCAGCTGCTTATATGAGAAAGAATTCAGCTGAGTTCCTTCCGTTTTTCCTTTCGGAAAATTTGATCGAAGATGATTCAGATGAAACACTTGCTGAGAAATTTGAAAACTATTGTAAAGAGGTGGAATCCACGGCTTTATGGGGAGGACAGTTAGAGCTTGGTGCCTTGACTCACTGCTTGAAGAAGCATATTATGATATTTTCAGGCTCCTTCCCGGATGTGGAGATGGGGAAGGAGTATAAATCCGCTGCTACCACTGCCTCATCGAGTTCAAGTATTATGCTTTCCTACCACAAGCATGCTTTTGGACTTGGTGAGCATTATAATTCTGTGGTCCCAGCATGA 999 0.4394 MSDRVGPMEDSQEIEKQVQEEVISDNGTEKKQETRDEMLSRHRKEISQLQKKEIEMKKAAARGSKAEQKAKKKQVEDEVTRLSANLKEKHAKELAELGYSSGGNGNEKGNLDSLIKAIAGVSVANQPDRARVSKAQQKRDRRAQQEAEREQRIQAEQSDTISDRTIENEKLEKKLKPLGLTVCEIKPDGHCLYRAVEDQLALLSGGRSPHTYQELREMAAAYMRKNSAEFLPFFLSENLIEDDSDETLAEKFENYCKEVESTALWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSAATTASSSSSIMLSYHKHAFGLGEHYNSVVPA* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0852 332 MobiDBLite consensus disorder prediction 1 78 - -
Amo16g0852 332 Gene3D - 166 331 - -
Amo16g0852 332 MobiDBLite consensus disorder prediction 132 165 - -
Amo16g0852 332 SUPERFAMILY Cysteine proteinases 150 331 IPR038765 -
Amo16g0852 332 MobiDBLite consensus disorder prediction 125 165 - -
Amo16g0852 332 PANTHER OTU DOMAIN CONTAINING PROTEIN 31 331 - -
Amo16g0852 332 Pfam OTU-like cysteine protease 186 326 IPR003323 -
Amo16g0852 332 Coils Coil 39 92 - -
Amo16g0852 332 ProSiteProfiles OTU domain profile. 180 332 IPR003323 -
Amo16g0852 332 PANTHER DEUBIQUITINASE OTUD6B 31 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0852 Amo-Chr16 13774511 13778116 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0852 K18342 - gmx:100780620 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0852 16 13774511 13778116 Amo16g0852 16 13774511 13778116 ECH
Amo16g0852 16 13774511 13778116 Amo06g0357 06 5017643 5021251 hybridization