Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0843 ATGGCTGAACGAGAGGAGATTGAGCTTAAATTCCGCATATATGATGGAACTGATATAGCGCACAGGACTTACTTACCATCTACTACAGTTGCTACCCTTAAGCAAAGGCTAATTACCGAGTGGCCTCAAGGCAAAACAGTTACACCAAAGTCAGTAAATGATGTAAAAATTATACATGCGGGCAAAGTTTTGGAAAACAACAAAACTCTTGCGGATTCCAGAATAACATTTGGTGACATCCCTGGTGGTGCTATTACCATGCATGTTGTAGTGCAACCTCCATTAGTTAAAAAGAAATCAGAAAAGAACCAGGAGAACAAGCAAAAGATGAATTCATGTGCATGCACCATCCTTTAG 357 0.4006 MAEREEIELKFRIYDGTDIAHRTYLPSTTVATLKQRLITEWPQGKTVTPKSVNDVKIIHAGKVLENNKTLADSRITFGDIPGGAITMHVVVQPPLVKKKSEKNQENKQKMNSCACTIL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0843 118 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 118 - -
Amo16g0843 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 118 IPR040015 -
Amo16g0843 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 5 116 IPR039540 -
Amo16g0843 118 Gene3D - 1 100 - -
Amo16g0843 118 CDD Ubl_MUBs_plant 6 94 - -
Amo16g0843 118 SUPERFAMILY Ubiquitin-like 3 98 IPR029071 -
Amo16g0843 118 PIRSF MUB 1 118 IPR017000 -
Amo16g0843 118 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0843 Amo-Chr16 13581460 13584533 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0843 - - pvy:116117185 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0843 16 13581460 13584533 Amo16g0843 16 13581460 13584533 ECH