Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0839 ATGGGCAGTAGTAGTGTGGAAGGTGGAGGACTGCAAAGCAACGTCAAGGTTGTGGAGAGGGCAATACTAATGGGGACGAGACGGCGCCCTTGCGAGGTCGTGGTGCGCCTTCTTGGCCTCTTTCTTACTCTTGTTGCCACCATCATCGTTGGTGTTGATAAAGAGACTAAGATCATTTCCTATGCTGGTATCAACTTCAAGGCCACTGCTAAGTGGGAATATCTCTCTGCTACCGTATTTTTGTTGGTGTCAAACGCCATAGCATGCTCGTATGCAGCTGCATCTTTGGTGATGTTGGAGATGGCAAAAAGAAGAAGAAACGATAATAGTGATGTGTTATCTACTTCAGTAGTAGAGTTTGGTGTAACGGTGATGGACCTTGTAATGATGGGACTGTTATTCTCAGCAAATGGTGCTGCTGCTGCTGTGGGAGTAATCGCACAGAACGGAAACTCCCACATTCAATGGATGAAAGTTTGCAATGTCTTTGATGCATATTGTCGCCACATGACCGCTGCATTTCTCCTCTCTTTCTTTGCATCCATTTCATTCCTCTTCATGGTTCTTTTCTCTCTCGTCAAACTCCATTATTACAAGTTTTCTACTTAA 609 0.4483 MGSSSVEGGGLQSNVKVVERAILMGTRRRPCEVVVRLLGLFLTLVATIIVGVDKETKIISYAGINFKATAKWEYLSATVFLLVSNAIACSYAAASLVMLEMAKRRRNDNSDVLSTSVVEFGVTVMDLVMMGLLFSANGAAAAVGVIAQNGNSHIQWMKVCNVFDAYCRHMTAAFLLSFFASISFLFMVLFSLVKLHYYKFST* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0839 202 Pfam Casparian strip membrane protein domain 28 182 IPR006702 -
Amo16g0839 202 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 5 196 - -
Amo16g0839 202 PANTHER CASP-LIKE PROTEIN 1E1 5 196 - -
Amo16g0839 202 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 33 194 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0839 Amo-Chr16 13543349 13544593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0839 - - adu:107492438 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0839 16 13543349 13544593 Amo16g0839 16 13543349 13544593 ECH