Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0827 ATGGCACCTCCAAATGAACCTGTTATTACTTCACTCACCAAACCCACTTCCTTAGAAAACGTTTTTCACTTGTCAGATTCCAAGCTCTCAGTGAAAGGTGTCCCATTACTCTCTCAAGTCCCTCACAATGTCTCTTTTACTCCGTTCTCTTCCAAACCCCATTCATCTGATGTTGATGCACCACCTTCACTACTTAACCGTGTTCTTGCTGCTTCTCACAAAGGTGGATTCCTCGGATTCTCACAGTCTGAACCCTCTGATAGGTTGATGAACTCCTTGGGAAGTTTCACTGACAGAAACTTTCTAAGCATATTCAGGTTCAAGACATGGTGGTCAACCCAATGGGTTGGAACRTCTGGCTCTGATCTTCAGATGGAAACTCAATGGGTTCTRCTTCATGTTCCTGAGCTCAATTCCTATGTGATCATCATTCCTATCATTGAAGSAAGTTTCAGGTCTGCKCTCCACCCTGGCTCTGATTCCCACATCATGATTTGTGCAGAGAGTGGCTCCACACAAGTGAAAGCTTCGAGTTTTAATTCAATTGCTTATGTTCATTTGTCTGAGAATCCATACAACTTGTTCAGAGAGGCTTATAGTGCTCTGAGAGTTCATCTCAACACTTTTAAGCTKTTGGAAGAGAAGAATCRCCCCAGCATTGTTGACAAGTTTGGTTGGTGCACTTGGGATGCATTCTACTTATCCGTGGAGCCTGTTGGAGTTTTTCATGGCTTGAAGGATTTTGCTGAGATTGGTGGTGTGTCTCCAAGGTTTGTGATCATTGATGATGGATGGCAAAGCATCAATTATGATGATGCTGATGACCCATATGAAGATGCCAAGAATCTTATCTTGGGRGGACAACAAATGACAGCAAGGCTTCACAGGTTTGAAGAATGTGACAAGTTCAAGAGTTACAAAAGAGGACTCATCTTAGGTCCTAATGCTCCTCCTTTTGATCCAAACAAGCCCAAGGCATTGATCTCAAAGGGGATTGAACTTGAACGTTTGGTGAAGAATCGAGACAAAGCAGTTAAATCCGGAAGCTCTGATTTGGCAGAGATTGAAGCAAGGATCAAGTTGGTAGAGAAAGAAATTGATGATCTCTTAGGTGGAGGAGATCAAAACATGAAGAAGAATAAAAGTGAATGTGGAGAAAAGGCAGAGGAGTGTGGATTGAAGGCTTTCACAAGGGATTTGAGGACAAAGTTTAAAGGGTTGGATGATATATATGTATGGCATGCACTTTGTGGTGCATGGGGTGGTGTGAGGCCAGGAGCTACACACCTGAAATCCAAGATAATCCATTGCAAACTATCACCAGGACTTGATGGAACTATGCCTGATCTTGCTGTGGTGAAACTTGTTGAAGGTTCCATTGGTCTTGTTCATCCTGATCAAGCCAATGACTTTTATGAATCTATGCACTCTTATCTTGCCAAATCTGGTGTTACAGGAGTTAAAATTGATGTCATTCATTGCCTTGAGTATGTGTCTGATGAATATGGAGGCAGAGTTGAGCTTGCAAAGGCTTATTATGATGGATTGACAAACTCCATAGTCAAGAATTTCAATGGAAGTGGAATAATAGCTAGCATGCAGCAGTGCAATGACTTTTTCTTTCTTGGAACAAAGCAACTTTCCATGGCAAGAGTTGGGGATGATTTTTGGTTCCAAGATCCATATGGTGACCCCATGGGAGTGTTTTGGCTACAAGGGGTACACATGATTCATTGCTCATACAACAGCTTGTGGATGGGGCAAATCATTCAGCCAGATTGGGACATGTTCCAATCAGATCATGTTTGTGCCAAGTTTCATGCAGGTTCAAGAGCCATTTGTGGCTCTCAAGTTTATGTGAGTGACAGTGTTGGCTTCCATGACTTTGATCTCATCAAGAGCCTTGTGTTCCCTGATGGCACTGTCCCTAGATGCATACATTTCCCACTTCCAACAAGAGATTGTCTCTTCAAGAACCCTCTATTTGACCACAAAACTCTCCTCAAAATTTGGAACTTAAATAAGTTTGGAGGAGTTATTGGTGCTTTCAACTGTCAAGGAGCTGGTTGGGATCCTAAAGAACACACGTTCAGGGGTTTTCCTGAGTGCTACAAAGCAGTAGAAGGTTCAGTTCATGTGAGTGAAGTTGAATGGGACCAAAAGGATGAAACAGTTCATATGGGTAATGCAGAAGAATATGCAGTGTATCATAACCAAGCTAAGAAGCTGCATTTGATGACTCCTAAATCTGAACCAATTAGATTTACATTACAACCTTCCACCTTTGAACTCTTCAGCTTTGTGGCAGTGACAAAGCTAAGTGGCAGGAATAATATCAAGTTTGCACCAATTGGGATAACAAACATGTTCAATAATGTTGGTACAATTCAAGAATTGGAATATGTTGAGATTGGTGCTAAGGTTAAGGTTAAAGGTGGTGGAAACTTCCTTGCTTACTCAAATGAATCTCCAAAAAAGTTTCAATTGAATGGAGTTGATGTGCCTTTTGAGTGGCTGCCAGATGGCAAGTTAACAGTCAACCTTCCTTGGATTCAAGAGGATGGTGGTGTTTCTGATTTAGCAATTATCTTTTAG 2595 0.4162 MAPPNEPVITSLTKPTSLENVFHLSDSKLSVKGVPLLSQVPHNVSFTPFSSKPHSSDVDAPPSLLNRVLAASHKGGFLGFSQSEPSDRLMNSLGSFTDRNFLSIFRFKTWWSTQWVGTSGSDLQMETQWVLLHVPELNSYVIIIPIIEXSFRSALHPGSDSHIMICAESGSTQVKASSFNSIAYVHLSENPYNLFREAYSALRVHLNTFKLLEEKNXPSIVDKFGWCTWDAFYLSVEPVGVFHGLKDFAEIGGVSPRFVIIDDGWQSINYDDADDPYEDAKNLILGGQQMTARLHRFEECDKFKSYKRGLILGPNAPPFDPNKPKALISKGIELERLVKNRDKAVKSGSSDLAEIEARIKLVEKEIDDLLGGGDQNMKKNKSECGEKAEECGLKAFTRDLRTKFKGLDDIYVWHALCGAWGGVRPGATHLKSKIIHCKLSPGLDGTMPDLAVVKLVEGSIGLVHPDQANDFYESMHSYLAKSGVTGVKIDVIHCLEYVSDEYGGRVELAKAYYDGLTNSIVKNFNGSGIIASMQQCNDFFFLGTKQLSMARVGDDFWFQDPYGDPMGVFWLQGVHMIHCSYNSLWMGQIIQPDWDMFQSDHVCAKFHAGSRAICGSQVYVSDSVGFHDFDLIKSLVFPDGTVPRCIHFPLPTRDCLFKNPLFDHKTLLKIWNLNKFGGVIGAFNCQGAGWDPKEHTFRGFPECYKAVEGSVHVSEVEWDQKDETVHMGNAEEYAVYHNQAKKLHLMTPKSEPIRFTLQPSTFELFSFVAVTKLSGRNNIKFAPIGITNMFNNVGTIQELEYVEIGAKVKVKGGGNFLAYSNESPKKFQLNGVDVPFEWLPDGKLTVNLPWIQEDGGVSDLAIIF* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0827 864 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 4-RELATED 1 864 - -
Amo16g0827 864 Pfam Raffinose synthase or seed imbibition protein Sip1 22 847 IPR008811 -
Amo16g0827 864 SUPERFAMILY (Trans)glycosidases 392 635 IPR017853 -
Amo16g0827 864 Coils Coil 352 372 - -
Amo16g0827 864 PANTHER - 1 864 IPR008811 -
Amo16g0827 864 SUPERFAMILY (Trans)glycosidases 215 295 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0827 Amo-Chr16 13338980 13342556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0827 5 864 Glycoside Hydrolase AT4G01970 58.573 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0827 K06611 - gmx:100815922 1387.09