Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0822 ATGTCGATCAGATTCGCCCTATGCTTATCGTTCTTCATCGCACTTCATTCTATTTCAGCTGCTTCTGCTGATTCCATCTATGGCTGCGGCGGCTTCGTCGAGGCGAGCTCATCGCTGGTAAAATCGAGGAGGCAAAGTGATTCCAAATTGGATTATTCTCATGTCACGGTTGAGCTTCAAACAGTGGATGGACTTGTAAAGGATAGAACACAGTGTGCTCCAAATGGATACTACTTTATTCCAGTTTATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTGAAGGATGGGCATGGGATCCAGAGAAGGTTCCAGTGGTGGTTGATGATAAAGGTTGTAATGGTAATGAAGATATCAATTTTCATTTCACAGGGTTTACTATATCTGGTAGAGTTGTTGGAGCTGTAGGTGGAGGAAGCTGTTCAGTTAAAAATGGTGGTCCTTCAAATGTAAAAGTTGAGCTATTGTCCCCTGCTGGGGATGTTGTCTCTGCTGTCTTAACTTCTCCATCAGGGAATTACTTGTTTAAAAATATAATTCCAGGAAAATATGAACTACGAGCTTCAAGTCCTAATATGAAAGTTGAAGTTAAAGGTTCAACCCAGGTGGAGTTGGGCTTTGGAAATGGTGTAGTTGATGATGTGTTCTTTGTCCCTGGCTATAGTATCAGTGGTTTTGTTGTTGCTCAGGGAAATCCAATATTAGGGGTACATGTTTTCCTATATTCAGATGATGTTTCTGAGATAGAATGTTTACAAGGTTCTCCAAATGGTCCACGAGAAGGGGTAGCTCTCTGTCATGCTGTGTCAGATGCTGATGGAAAGTTCACATTCAATTCTGTACCTTGTGGAAGTTATGAACTTGTACCTTACTATAAGGGTGAAAATACAGTATTTGATGTTTCACCGTCCAGCGTCTCGGTTAATGTTAAGCATCAACATGTAACGGTGCCTCAGAAATTCCAGGTAACTGGGTTTTCTCTTGGAGGCCGTGTGGTTGATGGAAATGAAATGGGAGTGGAGGGTGTTAAAATCATAGTGGATGGTCATGAAAGGTCTATTACGGATAATCAAGGATATTATAAGCTTGATCAGGTGACATCCAAGCATTATACCATTGAAGCCAAAAAGGAGCATTACAAATTCAGGAAGTTGGAGAATTATATGGTAAATTATAGCATTAACATCATATTAGATTTATTTGAGTCAGTTAGTGGTGGTCCGAAAGCCAAGGTGGCTTTGACTCATGGACCCGAGAATGTGAAACCACAAAAGAAGCAAACAGATGGAAATGGAAGATTCTGCTTTGAGGTTGTGCCTGGTGAATATCGGTTATCAGCTATTGCTGAGAATGCACCTGGGCTCATGTTTATGCCGTCATATATTGATGTTGTGGTCAAAAGTCCATTGTTAAATGTAGAATTTTCACAGGCTCTGGTCAATATTCGCGGTGCTGTATCCTGCAAGGAGAAATGTGGTCCATCCGTATCTGTTACTCTTGTCAGAAAGGTTGACAAACATAATGAAGATAGAAAGACAATTAAATTGACCACCGAGAGTAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAGTATAGGCTTGAGGTCAAACATAGTTCTCCTGAAGCAGTGACTTCAAAGGATGATTGGTGCTGGGAGCAGAGCTTCATTGATGTAAATCTTGGAGCCGAGGACTTAGAAGGAATTACATTTGTTCAGAAAGGCTACTGGGTCAATATTATCTCAACTCATAATGTTGATGGTTACTTGACTCAACCCGATGGGTCAAATGTGAATTTGAAGATCAAGAAAGGTTCCCAGAATATATGTGTAGAATATCCAGGAGTACATGAATTTAAATATGTAGACTCGTGTGTCTTCTTTGGGAGCTCATCTGTGAAAATTGATACATCTGTTCTGTCGCCTGTCCATCTAAAAGGAGAGAAGTATCTTCTTAAAGGACAAATAAATGTGCAGCCCAGCTCACTTGATTCATTACCCAAGAACATAGTTGTGGACATTAAAAATGGTGGAGCTGGTGGTGTTGATTCTGCTACAGCCAAACTTAAATCCCATGAAAAAGATCAAACAAATACTGCTATCTACGAGTACTCTGTTTGGGCCAATCTTGGAGAAAAGCTTACCTTTATTCCTCGGGACTCAAGGAATGATGGGGAGAAAAAACTTCTGTTTTACCCTAGAGAGCATCATATATCAGTGGCAGATGATAATTGTCAAACTTATATTCCTACATTTTCTTCTCGACCGGGAGTATATATTGAAGGATCAGTTTCTCCTCCTCTTTCTGGAGTCCATATCAGGCTTGTTGCAGCTGGAGATAGTAGCATTACTGCACTTAAAAGTGGTGAAATAGTACTTGAAACATCAACTGGGGCTGATGGCAACTTTGTGGCAGGTCCTCTGTATGATGATGTTGGTTACAATGTTGAAGCCTCAAAGTCAAATTTTCAGTGGCGTTATACATCACATGATGTTAGAGAACCCATTCCTTCTGTTCTGCTATCTTTGAGTGGTGACAATGGTTATAGAAACAACTCGGTATCTGGTGATGGAGGGTCATTCCTGTTTGATAATTTGTTTCCTGGAACATTCTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTTCAGCACAGGCAATAGAGCTTGGAGGAGGGGAATTTAAAGAAGTTGTTTTTCAGGCGACTCGTGTAGCTTACAGTGCTACTGGCTTCGTCACACTGTTGTCTGGCCAGCCCAAAGGAGGAGTGTCAGTTGAAGCTCGGGCAGAGTCAAAAGGTTATTTCGAGGAAGCTGTGACAGATTCTTCTGGGAATTACCGTCTCAGAGGACTACTGCCTGATACAGTCTATGCTGTTAAAGTAGCTAAAAGGGATGTTCTAGGCAGTTCAAACATAGAGCGTGCWTCTCCTYATTCTATTCCTGTCAAGGTTGGAACTGAGGATATCYGGGGTTTAGATTTCGTAGTTTTTGAGGAGCCAGAAATTACAATTGTTAGTTGCCATGTTGAAGGAAATGGTACMAAGGAACTGCATAAACACCTGATGGTAGAAATTAAGTCAGCTAGTGACCCAAATAAGATAGAGTCTGTCTTCCCCCTACCAATTTCTAACTACTTTCAAGTGAAGGGTTTATCTAAAGGCAGACACCTTCTGCAACTCCGGTCTGGCCTCCCTTTGGGTTCCCTTAAATTTGAATCCGATATCATTGAGGTAGATTTGGAGAAAGATACTCAAATCCATGTAGGCCCACTGAGATACAAGATCGACGATCAGATGAAGCAGGAGCTGACGCCCGCACCAGTATTCCCTCTTATAGCTGGATTATTTTTCATTGCACTATTCCTCAGCATTCCAAGATTGAAGGATCTGTATCAAGCAACTGTAGATATACCCACACCAGGACTCACTGCTACTTCAAGAAAAGACACAAGGAAGACAACGATGCGGAAGAAGACATATTAG 3495 0.4114 MSIRFALCLSFFIALHSISAASADSIYGCGGFVEASSSLVKSRRQSDSKLDYSHVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPEGWAWDPEKVPVVVDDKGCNGNEDINFHFTGFTISGRVVGAVGGGSCSVKNGGPSNVKVELLSPAGDVVSAVLTSPSGNYLFKNIIPGKYELRASSPNMKVEVKGSTQVELGFGNGVVDDVFFVPGYSISGFVVAQGNPILGVHVFLYSDDVSEIECLQGSPNGPREGVALCHAVSDADGKFTFNSVPCGSYELVPYYKGENTVFDVSPSSVSVNVKHQHVTVPQKFQVTGFSLGGRVVDGNEMGVEGVKIIVDGHERSITDNQGYYKLDQVTSKHYTIEAKKEHYKFRKLENYMVNYSINIILDLFESVSGGPKAKVALTHGPENVKPQKKQTDGNGRFCFEVVPGEYRLSAIAENAPGLMFMPSYIDVVVKSPLLNVEFSQALVNIRGAVSCKEKCGPSVSVTLVRKVDKHNEDRKTIKLTTESSEFLFSDVIPGKYRLEVKHSSPEAVTSKDDWCWEQSFIDVNLGAEDLEGITFVQKGYWVNIISTHNVDGYLTQPDGSNVNLKIKKGSQNICVEYPGVHEFKYVDSCVFFGSSSVKIDTSVLSPVHLKGEKYLLKGQINVQPSSLDSLPKNIVVDIKNGGAGGVDSATAKLKSHEKDQTNTAIYEYSVWANLGEKLTFIPRDSRNDGEKKLLFYPREHHISVADDNCQTYIPTFSSRPGVYIEGSVSPPLSGVHIRLVAAGDSSITALKSGEIVLETSTGADGNFVAGPLYDDVGYNVEASKSNFQWRYTSHDVREPIPSVLLSLSGDNGYRNNSVSGDGGSFLFDNLFPGTFYLRPVLKEYAFSPSAQAIELGGGEFKEVVFQATRVAYSATGFVTLLSGQPKGGVSVEARAESKGYFEEAVTDSSGNYRLRGLLPDTVYAVKVAKRDVLGSSNIERASPXSIPVKVGTEDIXGLDFVVFEEPEITIVSCHVEGNGTKELHKHLMVEIKSASDPNKIESVFPLPISNYFQVKGLSKGRHLLQLRSGLPLGSLKFESDIIEVDLEKDTQIHVGPLRYKIDDQMKQELTPAPVFPLIAGLFFIALFLSIPRLKDLYQATVDIPTPGLTATSRKDTRKTTMRKKTY* 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0822 1164 SUPERFAMILY Cna protein B-type domain 146 198 - -
Amo16g0822 1164 Gene3D - 332 407 - -
Amo16g0822 1164 Gene3D Immunoglobulins 143 208 IPR013783 -
Amo16g0822 1164 SUPERFAMILY Starch-binding domain-like 218 309 IPR013784 GO:0030246
Amo16g0822 1164 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 3 1155 - -
Amo16g0822 1164 PANTHER NODAL MODULATOR 1-RELATED 3 1155 - -
Amo16g0822 1164 SUPERFAMILY Carboxypeptidase regulatory domain-like 327 394 IPR008969 -
Amo16g0822 1164 SUPERFAMILY Cna protein B-type domain 835 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0822 Amo-Chr16 13163850 13175366 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0822 - - ccaj:109814730 1899.4