Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0770 ATGGCCTTTAGTGCAGTTGGCATGGCTACTTCTCCGGCTTCATCTGCCACAATGGACATAAGAACAACAAAGCATAACGGTCTTCGCCGATCAAGTTCCGGCATAGAACTTTCCACACGTTCCATTATGCAGAGGTCTTATTCTGATACCCACCTGTGTTGTGCTGTCAATCCCATACAAGCTACATCTCTGCAGCCAAAGCAAAAGAGCAACAAGTCAATGGGGATCTCGCCATTTCAATTTTCAGGCTCCATTTTACCGAATTCGCTGCGGTCTTTCTTGTTTGATCCGGAAACAAGCAAGGAAATGAATATGGGGGAGAAGGATCACAGCTCACATTTTGAGGAAAGTGCTGTGGAATGTGGTGAAGATGAGAAAATAAACAGGACTAATTGGATAGAGAGGCTTATGGAGATTAAGAAAAATTGGAGAAATAGAATACCAAAAGAGGAGATGGATCCGGATATGATATGTGACAATAATAGTAATGATGAATGTGACTGTGATGAAGGTTGTGTGGTGGATTATGTAGAAGATGGTCAAGAAGGGACTTATGATCACGACTCGTTCACAAAATTTCTGTCTCAAGTGTCATGGTCTGATACCAAATTATACTCTAAGCTTGCTTTCCTATGCAACATGGCTTATGTGATTCCAGAAATCAAGGCTAAGGACTTGAGAAGATACTACAGCCTTCAATTCATAACATCTTCTTTAGAGAAGAAAGCTGAAGTGGAAAAGTTGAAAGAGAGATTGGATAAGGACTCGACTCGCATACCTATCAATGACTCTGTAGCCTCTCAAGATGGATCAGAAAAAGGAAAAGATAACAAAGAGAGGCATCAAATCCGGCTTGCTTATGATATTGCTACCTCGGCCGCCTCTTATGTCCAATTGCGCGCTAAGGACCTCTTGTCCCTTACTGCCAAGCGACAGCAGCCGCAGAGTGACATTCTGGATTCTAATGGAAGGGAAAATTCAGAAGGATTTGAGGCGGAAGGCGCTTCCCGGGCTTATACATCAGAGGTTGCAGCTTATGTTGCAGCATCAACAATGACGGCTGTGGTAGCTGCTTGTGAGAAGGAGAAGCAAGAAGCAGCCAAGGATCTTCAGTCACTTCATTCCTCACCTTGTGAATGGTTTATATGTGATGATTCCAACACTTACACTAGATACTTTGTAATTCAGGGTTCAGACTCGTTGGCATCTTGGCAAGCAAACCTTTTCTTTGAGCCAACCAAATTTGAGGACACAGATGTACTTGTTCATAGAGGAATTTATGAAGCAGCAAAAGGAATATATGAGCAATTTTTGCCAGAAATAAAGGCTCACTTGAAGAGACATGGAGATCGCGCTAAGCTTCAATTCACTGGACATTCCCTTGGGGGAAGTCTCTCTCTTCTGGTTCATTTGATGCTTTTGAGCAGGAAGGTTGTCAGTCCCTCAACTCTTCGACCGGTCGTGACTTTTGGGTCGCCTTTTGTATTCTGTGGAGGCCATAAATTGCTTGATCATCTAGGATTGGATGAGAGCCATATCCATTGTGTAATGATGCATAGAGATATAGTTCCCAGGGCCTTCTCATGCAACTATCCTAACCATGTAGCCCTTGTCCTTAAGCGCCTAAACAGCACGTTTCGCTCGCATCCTTGTCTCATAAAAAATAAGTTGTTGTACTCACCATTGGGTAAAATATTCATTCTCCAACCTGATGAGAGAACATCTCCTCCTCATCCTTTGCTACCTTCAGGAAGTGCCTTCTATGCCTTGGACAGTGCTAGATGTGGATACACTCCAAGTGTTCTTAGAACTTTTCTCAATCAACCACACCCCATTGAGACACTTAGTGATCCAACAGCATATGGTTCAGAAGGCACAATTCTAAGGGACCATGACTCCAGCAACTACCTCAAAGTTGTCAATGGAGTGTTGAGACAGCATTCGAAGAATATCGTCCGCCAAATGAGGAAGCAGAGGATTAATGAGCTTTGGCCATTGCTGACTACACCATCTCCACACTCATGGAACCATGAACAGAACTTGGAGAGGTGTAATTTGATGACAAAGGAGATAGTGACAGGGGTCTAA 2088 0.4334 MAFSAVGMATSPASSATMDIRTTKHNGLRRSSSGIELSTRSIMQRSYSDTHLCCAVNPIQATSLQPKQKSNKSMGISPFQFSGSILPNSLRSFLFDPETSKEMNMGEKDHSSHFEESAVECGEDEKINRTNWIERLMEIKKNWRNRIPKEEMDPDMICDNNSNDECDCDEGCVVDYVEDGQEGTYDHDSFTKFLSQVSWSDTKLYSKLAFLCNMAYVIPEIKAKDLRRYYSLQFITSSLEKKAEVEKLKERLDKDSTRIPINDSVASQDGSEKGKDNKERHQIRLAYDIATSAASYVQLRAKDLLSLTAKRQQPQSDILDSNGRENSEGFEAEGASRAYTSEVAAYVAASTMTAVVAACEKEKQEAAKDLQSLHSSPCEWFICDDSNTYTRYFVIQGSDSLASWQANLFFEPTKFEDTDVLVHRGIYEAAKGIYEQFLPEIKAHLKRHGDRAKLQFTGHSLGGSLSLLVHLMLLSRKVVSPSTLRPVVTFGSPFVFCGGHKLLDHLGLDESHIHCVMMHRDIVPRAFSCNYPNHVALVLKRLNSTFRSHPCLIKNKLLYSPLGKIFILQPDERTSPPHPLLPSGSAFYALDSARCGYTPSVLRTFLNQPHPIETLSDPTAYGSEGTILRDHDSSNYLKVVNGVLRQHSKNIVRQMRKQRINELWPLLTTPSPHSWNHEQNLERCNLMTKEIVTGV* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0770 695 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 1 695 IPR043367 GO:0008970
Amo16g0770 695 PANTHER PHOSPHOLIPASE A1 PLIP1, CHLOROPLASTIC 1 695 - -
Amo16g0770 695 Gene3D alpha/beta hydrolase 332 552 IPR029058 -
Amo16g0770 695 MobiDBLite consensus disorder prediction 1 21 - -
Amo16g0770 695 CDD Lipase_3 376 532 - -
Amo16g0770 695 MobiDBLite consensus disorder prediction 315 334 - -
Amo16g0770 695 MobiDBLite consensus disorder prediction 259 279 - -
Amo16g0770 695 Pfam Lipase (class 3) 393 530 IPR002921 GO:0006629
Amo16g0770 695 SUPERFAMILY alpha/beta-Hydrolases 376 567 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0770 Amo-Chr16 12288977 12294082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0770 1 669 Acyl Lipid Metabolism Gene Families AT3G61680 54.118 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0770 - - gmx:100790575 1004.59