Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0753 ATGTCGATACCGAAGGAGCCCGAGCAGGTGATGAAGATGAGGGGAGGGTCGGTGCTTGGCAAGAAGACCATTCTCAAGAGCGACCATTTCCCTGGTTGCCAGAACAAGCGTCTCTCTCCTCAGATCGAAGGTGCTCCTAATTACCGCCAGGCTGATTCCTTACATGTTCATGGCGTTGCTATCCCAACCATTGATGGAATCAGGAATGTTCTCAAGCACATTGGTGCTCAGAAACAGGGCAAGAGAGCTCATGTTCTCTGGATTAGCCTTCGCGAGGAACCGCTTGTGTACATCAATGGTCGCCCCTTTGTTTTGCGTGAGGTGGAGAGACCGTTCTCTAACCTTGAGTATACGGGAATTAATAGGGAACGGGTTGAACAAATGGAAGCTCGTTTGAAACAGGACATACTGTTGGAAGCTGCCAGATATGGAAATAAAATCCTTGTGACCGATGAACTTCCAGATGGTCAGATGGTGGACCAATGGGAACCAGTATCATGTAATTCCGTGAAGACACCATTAGAGGTGTATGAGGAGTTACAAGTGGAGGGATACCTAGTTGATTATGAGCGAGTTCCTATAACTGATGAAAAATCACCAAAGGAACAGGATTTTGATATTTTGGTTCATAAAGTTTTTCAAGCTGATGTAAATACAGAGATAATTTTTAACTGTCAAATGGGACGTGGACGAACTACAACTGGAATGGTCATTGCAACTTTGGTATACCTAAACCGAATTGGGGCCTCTGGGATTCCAAGAAGCAATTCAATTGGAAGAATTTCTCAAAGTATGACCAATATAGCTGACCATTTACCTAACTCAGAGGAGGCAATTCGCAGGGGAGAATACGGAGTCATAAGAAGCTTGATCCGGGTATTAGAGGGTGGTCTTGAGGGGAAAAGACAAGTGGACAAAGTCATTGACAGGTGTGCTTCAATGCAGAACCTGCGTGAAGCAATTGCCACCTATCGTAACAGCATTCTACGACAACCTGATGAGATGAAAAGAGAGGCATCACTTTCTTTTTTTGTGGAGTACTTGGAGAGATATTACTTTTTGATATGTTTTGCTGTTTACATTCATTCAGAAAGGGCGGCACTTGAATCTAGTGCTGCTGGTCATAGTAGTTTTGCAGATTGGATGAGAGCAAGACCTGAACTCTACAGTATTCTTCGCAGGTTACTTAGGAGAGATCCAATGGGTGCACTTGGATATTCATCTTTGCAACCGTCTCTAAAAAAGATAGCCGAATCTACTGATGGCCGCCCCTGTGAGATGGGTGTGGTTGCTGCTTTGAGGAATGGAGAGGTTCTTGGTAGTCAAACCGTTCTAAAAAGTGATCACTGTCCAGGGTGTCAAAACCCAAGTTTGCCCGAGAGAGTGGACGGGGCTCCTAATTTCCGAGAGGTTCCTGGGTTTCCAGTTTATGGTGTAGCAAATCCAACAATTGATGGTATTCGATCTGTCATTCGTAGGATTGGTAGCTCTAAAGGTGGACGCCCAGTACTTTGGCATAATATGAGAGAAGAACCTGTTATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTAGAAAGACCATACAAAAATATGCTAGAATACTCGGGAATTGATCGTGAAAGAGTGGAGAAAATGGAGGCTCGGTTGAAAGAAGATATACTTCGGGAAGCTAACCACTATGGCAATGCCATAATGGTTATTCATGAAACAGATGATGGCCATATAAGTGATGCTTGGGAGCATGTCACGCCTGACATGGTTCAGACTCCACTTGAAGTTTTTAAAAGCCTCGAGGCTGATGGGTTTCCTATTAAATATGCGCGAGTTCCCATCACTGATGGAAAAGCTCCTAAAAGTTCTGATTTCGACACAATGGCATGTAATATTGCTTGTGCTGCAAAGGATACTGCTTTTGTCTTCAATTGTCAGATGGGTAGGGGCAGGACAACCACTGGTACTGTTATAGCTTGCCTTGTGAAGCTTCGAATTGATTATGGTAGGCCCATTAAAATACTAGGTGATGATGTGACCCATGAAGAATCAGATAGTGGTTCCTCAAGTGGAGATGAAGCTGGGGGCAATGCCACTGCATTAACCTCCGATACTTTGCAAATAACAACAGATGAGAAACAAAGCCGTGTCTTTGGTATAAATGACATCCTCTTGCTGTGGAAGATAACAACATTATTTGAAAATGGTGTTGAATGTCGGGAAGCCTTAGATGCTATTATTGATAGATGTTCTGCTCTTCAAAACATTCGTCAAGCTGTTCTGAAGTATAGAAAAGTATTCAATCAACAGCATGTTGAGCCTAGAGTAAGGAGGGTAGCTTTGAATCGTGGTGCTGAGTACCTAGAGAGGTACTTCCGTTTAATTGCTTTCGCAGCATATCTTGGAAGTGGAGCATTTGATGCGTTCTGTGGACAAGGAGGATCCAAAATGACATTTAAGGTTTGGTTGCACCAGAGGCCAGAGGTGCAGGCTATGAAATGGAGCATCAGGCTGAGGCCAGGGCGATTTTTCACTGTCCCTGAAGAGTTGAGGCAACCACAAGAATCTCAGCATGGAGATGCAGTGATGGAGGCTATTGTCAAGGCCCGAAATGGTTCTGTTCTCGGGAATGGTTCCATTCTGAAAATGTATTTCTTTCCTGGTCAGAGAACTTCCAGTAACATACAAATACATGGTGCACCAAATGTTTACAAGGTTGATGAATACCCTGTGTATAGCATGGCAACTCCAACCATCACTGGCGCCAAGGAGATGCTAACCTATTTGGAAGCTAAGCCTACAACTGCCTTAACTGCTAGAAAAGTTATATTAACTGATGTGAGGGAGGAAGCAGTTGTTTATATCAATGGTACTCCCTTTGTCCTAAGGGAGTTAAACAAACCTGTTGATACTCTCAAGTATGTGGGAATCACTGGTCCCGTGGTGGAGCACATTGAAGCTCGGTTGAAAGAAGATATACTAGCTGAAATAAGACATTCTGGAGGCCGAATGCTACTACACCGTGAAGAATATAACCCTTCAACAAATCAATCTGATGTGGTTGGATACTGGGAAAACATTTCGGCAGATGATGTGAAGACACCTTCAGAAGTTTATTCTGCTCTAAAAGATGATGGATATGATATTGTCTACCAGAGGATCCCCTTAACACGAGAAAGGGATGCTTTAGCCTCAGATGTTGATGCAATTCAGTATTGTAAAGATGATTCTGCAGGGAGTTATCTTTTTGTATCACACACAGGTTTTGGTGGAGTTTCATATGCAATGGCCATCATCTGTTGTAGACTTGGTGCTGAGGCAAACTTTGCATCCACAGTCCCACAGCCATTATATGGTCCCCACATATGTGCAGTGTCTGAAGAGACTCTGCCATCCCGAGCTTCTGACGAAACAGCACTCAGGATGGGCGACTATCGTGACATTTTGAGCCTTACAAGAGTCCTCATATATGGCCCCCAAAGCAAAGCAGATGTTGATATTGTCATTGAGAGATGTGCAGGTGCAGGGCATATTCGAGATGATATTCTTCATTACAGTAAAGCATTTCAAAAGTTCACCGACGATGATGATGAGAAACGTGCATATCTTATGGACATGGGTATCAAGGCTTTGAGGCGGTATTTTTTCCTTATCACATTCAGATCCTACCTCTATTGCACCTCTCCTTCGGACATGGAATTTTCTGCATGGATGGATGCTAGGCCAGAGCTTGGTCATCTATGTAACAATCTAAGAATAGACAAATAA 3765 0.4351 MSIPKEPEQVMKMRGGSVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRQADSLHVHGVAIPTIDGIRNVLKHIGAQKQGKRAHVLWISLREEPLVYINGRPFVLREVERPFSNLEYTGINRERVEQMEARLKQDILLEAARYGNKILVTDELPDGQMVDQWEPVSCNSVKTPLEVYEELQVEGYLVDYERVPITDEKSPKEQDFDILVHKVFQADVNTEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRSNSIGRISQSMTNIADHLPNSEEAIRRGEYGVIRSLIRVLEGGLEGKRQVDKVIDRCASMQNLREAIATYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYIHSERAALESSAAGHSSFADWMRARPELYSILRRLLRRDPMGALGYSSLQPSLKKIAESTDGRPCEMGVVAALRNGEVLGSQTVLKSDHCPGCQNPSLPERVDGAPNFREVPGFPVYGVANPTIDGIRSVIRRIGSSKGGRPVLWHNMREEPVIYINGKPFVLREVERPYKNMLEYSGIDRERVEKMEARLKEDILREANHYGNAIMVIHETDDGHISDAWEHVTPDMVQTPLEVFKSLEADGFPIKYARVPITDGKAPKSSDFDTMACNIACAAKDTAFVFNCQMGRGRTTTGTVIACLVKLRIDYGRPIKILGDDVTHEESDSGSSSGDEAGGNATALTSDTLQITTDEKQSRVFGINDILLLWKITTLFENGVECREALDAIIDRCSALQNIRQAVLKYRKVFNQQHVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSGAFDAFCGQGGSKMTFKVWLHQRPEVQAMKWSIRLRPGRFFTVPEELRQPQESQHGDAVMEAIVKARNGSVLGNGSILKMYFFPGQRTSSNIQIHGAPNVYKVDEYPVYSMATPTITGAKEMLTYLEAKPTTALTARKVILTDVREEAVVYINGTPFVLRELNKPVDTLKYVGITGPVVEHIEARLKEDILAEIRHSGGRMLLHREEYNPSTNQSDVVGYWENISADDVKTPSEVYSALKDDGYDIVYQRIPLTRERDALASDVDAIQYCKDDSAGSYLFVSHTGFGGVSYAMAIICCRLGAEANFASTVPQPLYGPHICAVSEETLPSRASDETALRMGDYRDILSLTRVLIYGPQSKADVDIVIERCAGAGHIRDDILHYSKAFQKFTDDDDEKRAYLMDMGIKALRRYFFLITFRSYLYCTSPSDMEFSAWMDARPELGHLCNNLRIDK* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0753 1254 MobiDBLite consensus disorder prediction 678 697 - -
Amo16g0753 1254 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 432 604 - -
Amo16g0753 1254 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 430 663 IPR029021 -
Amo16g0753 1254 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 603 1254 - -
Amo16g0753 1254 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 2 339 - -
Amo16g0753 1254 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 343 484 - -
Amo16g0753 1254 Pfam Inositol hexakisphosphate 88 242 - -
Amo16g0753 1254 Pfam Inositol hexakisphosphate 506 662 - -
Amo16g0753 1254 Pfam Inositol hexakisphosphate 945 1099 - -
Amo16g0753 1254 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 864 1066 IPR029021 -
Amo16g0753 1254 PANTHER METAL ION-BINDING PROTEIN 603 1254 - -
Amo16g0753 1254 PANTHER METAL ION-BINDING PROTEIN 432 604 - -
Amo16g0753 1254 PANTHER METAL ION-BINDING PROTEIN 2 339 - -
Amo16g0753 1254 PANTHER METAL ION-BINDING PROTEIN 343 484 - -
Amo16g0753 1254 CDD PTP_paladin 14 311 - -
Amo16g0753 1254 CDD PTP_paladin 434 749 - -
Amo16g0753 1254 SMART PTPlike_phytase_2 506 662 - -
Amo16g0753 1254 SMART PTPlike_phytase_2 88 243 - -
Amo16g0753 1254 SMART PTPlike_phytase_2 944 1102 - -
Amo16g0753 1254 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 8 247 IPR029021 -
Amo16g0753 1254 Gene3D Protein tyrosine phosphatase superfamily 445 686 IPR029021 -
Amo16g0753 1254 Gene3D Protein tyrosine phosphatase superfamily 881 1105 IPR029021 -
Amo16g0753 1254 Gene3D Protein tyrosine phosphatase superfamily 23 279 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0753 Amo-Chr16 12025049 12034966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0753 - - gmx:100788460 2234.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0753 16 12025049 12034966 Amo06g0040 06 427417 437350 hybridization