Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0599 ATGTTGAGAATGAAGTATTGTCACATTTCAGCACTAGTGTTGTGCATGTTTCTCCTTTCCTTAATTCTTTCAATCCAAGCTAGACATCATTCCCATAAAAGACAGAGACATTCACATTCTCATAAATCATCTAGAACTTTTGATGTAACAAAATTTGGAGCCATTGGAGATGGAATAACAGATGATACAGAGTCATTCAAGATGGCATGGGACACTGCCTGTGAAAGTGAATCAGAATTTAATGTTATTATTGTTCCCAAAGGTTTCTCCTTCCTCATTCGGCCCACTATTTTCACTGGTCCTTGCCATGGTTACTTAGTATTGAAGGTGGATGGAACTATAATGCCACCAGATGGACCTGATTCTTGGCCAAAGAACAATACTAAGCGTCTATGGCTGGTGTTTTATAGAATCAATGGAATGTCACTTGAAGGAGGTGGTTTAATAGATGGAAGAGGAGATAAATGGTGGGAACTTCCTTGTAAGCCTCACAGGGGACCAAATGGAACAACTGCTCCTGGACCTTGTGATAGCCCAATGGCCATAAATTTTTTTATGGGTTCCAACTTGACTGTGCAAGAACTTAGGGTCAGGGACAGCCCCCAGATTCATTTAAGATTTGATGCATGCAGAAGTGTCCACATTGAATCTATCCATATAAAAGCTCCAAGACTAAGCCCCAACACTGATGGAATTCACATAGAAAACAGCACTGATGTCAAAATATATAATACTGTGATTTCTAATGGTTAG 753 0.3958 MLRMKYCHISALVLCMFLLSLILSIQARHHSHKRQRHSHSHKSSRTFDVTKFGAIGDGITDDTESFKMAWDTACESESEFNVIIVPKGFSFLIRPTIFTGPCHGYLVLKVDGTIMPPDGPDSWPKNNTKRLWLVFYRINGMSLEGGGLIDGRGDKWWELPCKPHRGPNGTTAPGPCDSPMAINFFMGSNLTVQELRVRDSPQIHLRFDACRSVHIESIHIKAPRLSPNTDGIHIENSTDVKIYNTVISNG* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0599 250 Gene3D - 30 250 IPR012334 -
Amo16g0599 250 PANTHER - 42 250 - -
Amo16g0599 250 Pfam Glycosyl hydrolases family 28 80 250 IPR000743 GO:0004650|GO:0005975
Amo16g0599 250 PANTHER POLYGALACTURONASE/GLYCOSIDE HYDROLASE FAMILY PROTEIN 42 250 - -
Amo16g0599 250 SUPERFAMILY Pectin lyase-like 41 250 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0599 Amo-Chr16 9627719 9630053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0599 47 250 Glycoside Hydrolase AT1G02460 62.136 1.59e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0599 - - gmx:100797770 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0599 16 9627719 9630053 Amo16g0599 16 9627719 9630053 ECH