Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0574 ATGGCAAATAGAGCTGATCCTGATATTGACGACGATTTGCGTGATCTTTACAAGGAGTACACTGGTCCTCTGGGATCTGCTCCTACCAATACGCAAGATAGGGAAAAATCAAACAAAAGGTCTCATGCTGGTTCAGATGAAGAGGAGGAGCCACGGGACCCTAATGCTGTTCCAACCGATTTCACCAGCCGAGAGGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACTGAGAGGAATTGGAAGAAAAGGAAAGAAGAGGAAATGATCTGCAAACTTTGTGGAGAATCAGGGCATTTCACTCAGGGTTGTCCGACTACTCTTGGAGCAAACCGCAAGTCTCAAGATTTCTTTGAAAGGATACCCGCAAGGGATAAAAATGTAAGAGCGCTTTTCACAGAGAAAGTTCTAAACAAGATTGAAAGGGAAATTGGCTGCAAAATTAAGATGGATGAGAAATTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCGGTACACAAGATTAGAGAGGAGGGTGAACAAAGAGGAACTTCTAGTTCTCACATGGCCAGGTCAAGGTCTCCTGAGCAAAGTCCTGTTGGTGCTCGGTTTCAACGATCTGAGCCCCAGAGGTCTCATTCTGGACCGCGAAATGCATCTCAGTTTCAACAAAGGTTTGGTAGGCAAGAGAGAGCTGTTGAAGACCGCGTGCGAGAGGACATGCAAAAGTTTGCAAGAGGTTCTCCACAAGCTTATGGTAATAGTGGAGCAAGAGGTCGGTCAAGCCATTCAAGATCTCCAAGACAGCCCCCTTACACAGGGAACTCATATAATTCAATTGATGGCCGCAATCAGAACATAGGATCTTATAGGAATGATGGGTGGGATTCTCACAGAAGAGAATCTGCAGGGATCCAACCCAGTCATCAGTTTGATTATAGCACTTCCCCCAAGACTTTAGAAGAATTAGAGTTGGAGTATAAGAAAGAGGCAACTGAGCTAATGAAAAACCGTGACAGGGAAGAAGATGAAGAAAATTTCAAGCATCGTGAGGCTGTTCGAGACTTGAGGGAGAACTACATGAACAAAGTTGCTATGTTAAGGGTCTCACATGCTAAACAATGGGAAGAGTTTCTTCAGCTTGAAGCCCAGAGGCATCAACAGCACACAATCCAACAAATCCCTTCTGGTTTTGGCAGTTATAAGCAGCAGAATTTCACCGAATATGATGGTTCCGCTGTCAATCCTCACTATGCTGGGCCCAACTTACCCTTGGAATCGAGGAACAGGTTCTCAGACATGGAGACTTATCCTACCAGGCCTCACGATAATTTTGGTGATTTTCAGAGGCGTGGTGGAGATTTTGCAAAAGCTTACAACAGATATTAA 1386 0.4437 MANRADPDIDDDLRDLYKEYTGPLGSAPTNTQDREKSNKRSHAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPTTLGANRKSQDFFERIPARDKNVRALFTEKVLNKIEREIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGEQRGTSSSHMARSRSPEQSPVGARFQRSEPQRSHSGPRNASQFQQRFGRQERAVEDRVREDMQKFARGSPQAYGNSGARGRSSHSRSPRQPPYTGNSYNSIDGRNQNIGSYRNDGWDSHRRESAGIQPSHQFDYSTSPKTLEELELEYKKEATELMKNRDREEDEENFKHREAVRDLRENYMNKVAMLRVSHAKQWEEFLQLEAQRHQQHTIQQIPSGFGSYKQQNFTEYDGSAVNPHYAGPNLPLESRNRFSDMETYPTRPHDNFGDFQRRGGDFAKAYNRY* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0574 461 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
Amo16g0574 461 MobiDBLite consensus disorder prediction 227 242 - -
Amo16g0574 461 Coils Coil 319 343 - -
Amo16g0574 461 MobiDBLite consensus disorder prediction 176 315 - -
Amo16g0574 461 MobiDBLite consensus disorder prediction 1 68 - -
Amo16g0574 461 MobiDBLite consensus disorder prediction 253 291 - -
Amo16g0574 461 ProSiteProfiles Zinc finger CCHC-type profile. 90 104 IPR001878 GO:0003676|GO:0008270
Amo16g0574 461 PANTHER OS01G0252900 PROTEIN 1 461 - -
Amo16g0574 461 MobiDBLite consensus disorder prediction 184 226 - -
Amo16g0574 461 MobiDBLite consensus disorder prediction 33 55 - -
Amo16g0574 461 PANTHER OS01G0252900 PROTEIN 1 461 - -
Amo16g0574 461 MobiDBLite consensus disorder prediction 1 18 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0574 - - gmx:100806099 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0574 16 9241863 9245154 Amo16g0574 16 9241863 9245154 ECH