Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo16g0551 | ATGCAGACGAGAAAACAAGATGAACTGGAAGATAGTGGAGAGTTCCCCGCGGGAATGACCGGATCTGGTCGCTTGGCGAGTGTTCGGCCAGTGAGGACGGCGCCGGAGAAGATATCGGAGAAAGTGGCGGAGAGCATAAAGAACGCGCAGGAGACGTGCTCGGAGGATCCGGCGAGCGGAGAGTGCGTGGCGGCGTGGGATGAGGTAGAGGAACTGAGCGCCGCCGCCAGCCACGCCAGGGACAGGCTGAAGGACTCAGATCCGCTTGAGGACTTCTGTAAGGACAACCCGGAGACCATCGAGTGCAAGACTCATGATAACTGA | 324 | 0.5895 | MQTRKQDELEDSGEFPAGMTGSGRLASVRPVRTAPEKISEKVAESIKNAQETCSEDPASGECVAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETIECKTHDN* | 108 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo16g0551 | 107 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Amo16g0551 | 107 | Pfam | CP12 domain | 38 | 106 | - | - | |
| Amo16g0551 | 107 | PANTHER | CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC | 20 | 106 | IPR039314 | - | |
| Amo16g0551 | 107 | PANTHER | CALVIN CYCLE PROTEIN CP12-1 | 20 | 106 | - | - | |
| Amo16g0551 | 107 | SMART | CP12_2 | 38 | 107 | IPR003823 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo16g0551 | Amo-Chr16 | 8946626 | 8947788 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo16g0551 | - | - | ahf:112756475 | 193.356 |