Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0542 ATGTTAGAGCATCCGCAACAGGTGGTGGTGGAGTTGGACTCCGCCATGAAGGAGAGAAGGCCAACTCCATTGCCTGCTGACAAGAAGTTAGAGATGAGAAAAATGTACGTCATGCTTCCGGTGAAGCGAGGGAAGGCGGTGGGACTGAGCGGCGAAGAGTGCCGCCGCATTGTGATGATGGTTAATTATTCTGCCACACTTCATTGCAAGTACAACGATCTTGCGGTGTGTTCTCCAAGGCTTCTTCCTTGGATCGCAAGGCTTTGGCGGAACAATGAAATGTTGCAGAGAAAGGAGGAAAACATGGCGGGAAATAATCTTGAACAACAAGTGCCAGAAATCATTGAAGAGAGGCCGGAATATTATCTGAGTAGGCAAATGTCCGGGAAAGGATGGAAGCCTAGCTTGGACACCATTAAGGAGAAGAACAAGATTAAGACAAAACTCTCTCCTTGGTTCTTCATTAAAAGTTTTTAA 477 0.4654 MLEHPQQVVVELDSAMKERRPTPLPADKKLEMRKMYVMLPVKRGKAVGLSGEECRRIVMMVNYSATLHCKYNDLAVCSPRLLPWIARLWRNNEMLQRKEENMAGNNLEQQVPEIIEERPEYYLSRQMSGKGWKPSLDTIKEKNKIKTKLSPWFFIKSF* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0542 158 Pfam PADRE domain 1 141 IPR025322 -
Amo16g0542 158 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 149 - -
Amo16g0542 158 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0542 Amo-Chr16 8845751 8846329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0542 - - adu:107492297 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0542 16 8845751 8846329 Amo16g0542 16 8845751 8846329 ECH
Amo16g0542 16 8845751 8846329 Amo09g0672 09 10947317 10947925 PCT
Amo09g0672 09 10947317 10947925 Amo16g0542 16 8845751 8846329 PCT