Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0534 ATGGCAGTCACCTCTCCCTCGCTTACCGCTACAGAAAAGAAGCACTGGTGGCTCACCAACCGGAAGATTGTTGACAAGTACATAAAGGACGCAAGGAGTCTCATTGCGACGCAAGAACAGAGCGAGATCGCCTCGGCGCTCAACCTTCTAGACGCTGCTCTGGCGATATCACCGAGGCTGGACCATGCACTCCACCTCAGAGCACGGTGCTTGCTGTACCTGCGGCGGTACAAGGATGTCGCCGATATGCTTCAGGACTACATTCCCAGCTTGAAGATCGCCAGTGATGCTGATTCAAGTTCTGTTTCCTCTTCTTCCTCTGATGGGTCTTCCAGGGAAGGAGTGAAGCTTCTGTCCCCTGAGGAACCCGTGAGGGACCAAACATTCAAGTGCTTCTCCGTTTCCGATCTGAAGAAGAAGGTCATGGCTGGACTCTGTAAAACCTGCGACAAGGAAGGGCAATGGAGGTACTTGGTTTTGGGTCAAGCGTGCTGCCACTTAGGCCTAATGGAGGACGCAATGGTCCTCCTGCAGACCGGAAAACGCCTCGCCACTGACGCATTCCGACGACAGAGCGTCTGCTGGTCTGATGACAGCTTCTCCTTATCCAGCATTCCCTTCTCCGCCGACTCAAACACCACAAACCCGCCTCCTCCTCCACCTGCCACGCCACCCCGCACCCCTCTCACCGACGCCGAGCACATTTCCCAGCTCCTCAGCCACATCAAATTCCTGCTGCGGCGGCGTGCGGCGGCCCTTGCAGCACTTGATGCGGGTCTCCACTCGGAGGCCATTCGGCATTTCTCCAAGATTCTAGATGGTCGCAGGGCTGCACCTCAGGCCTTCCTGGCAGAATGCTACATGCATAGAGCCTCCGCCTACCGCGCCGCCGGCCGCATTGCGGAGTCCATAGCGGACTGCAATCGCACCCTTGCCCTTGATCCTACCTGCATTCCAGCCCTTGACACCAGAGCTTCCCTCTTCGAAGCAATTCGCTGCCTCCCGGATTCTCTCCACGACCTCGAACACCTCAAGCTTTTGTACAATTCAATTCTCAGGGACCGGAAGCTTCCTGGCCCTGCGTGGAAGCGGCGCAATGTGAGGTACAGGGAAATTCCAGGGAAGCTCTGCGCCCTTGCCGTGAAGATTCAAGAGCTGAAGCAGAGGCTGGCTTCAGGGGAGACTGGGAATAATGTAGATTACTATGCTCTCATTGGTGTGAGGCGCGGTTGTTCAAGATCTGAGTTGGAGAGGGCTCATGTGTTGCTCACTCTAAAGCATAAACCCGACAAGGCTACCGGATTCATCGAAAGGTGCGAGCTGGCCGACGAAAGAGACCTTGATTCCATCAAGGAGAAGGCCAGGATGTCAGCTTTGTTGCTGTATAGGTTGGTTCAGAAAGGTTACACAAATTTGATGAGTGCCGTCTTAGATGAAGAGGCTGCTGAGAAGCAGAGGAAGAAGCAGGCTGCATTGCATGCAGCTGCACACGCACACGCACACGCACACACGCAAGTTATGGTGCAACAGAAACCTAAGGACCCTGCTCCTGAATTGAACAATAATAGTATTGAGGTAGATAATTTGGTCACTGATAATATCAGCAGCAATGATTCAATGGAGAGTAACAATAACAAGTCTACAATATCATCATCTACTGTCAATCCTGCAGTTTTTCAAGGTGTTTTCTGTCGCGACCTGGCGGCAGTTGGGACCTTGCTTTCGCAGGTCGGATTCAATAGGCCAATTCCGGTGAAGTATGAAGCATTGAGCTGCTAA 1779 0.5334 MAVTSPSLTATEKKHWWLTNRKIVDKYIKDARSLIATQEQSEIASALNLLDAALAISPRLDHALHLRARCLLYLRRYKDVADMLQDYIPSLKIASDADSSSVSSSSSDGSSREGVKLLSPEEPVRDQTFKCFSVSDLKKKVMAGLCKTCDKEGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLATDAFRRQSVCWSDDSFSLSSIPFSADSNTTNPPPPPPATPPRTPLTDAEHISQLLSHIKFLLRRRAAALAALDAGLHSEAIRHFSKILDGRRAAPQAFLAECYMHRASAYRAAGRIAESIADCNRTLALDPTCIPALDTRASLFEAIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRRNVRYREIPGKLCALAVKIQELKQRLASGETGNNVDYYALIGVRRGCSRSELERAHVLLTLKHKPDKATGFIERCELADERDLDSIKEKARMSALLLYRLVQKGYTNLMSAVLDEEAAEKQRKKQAALHAAAHAHAHAHTQVMVQQKPKDPAPELNNNSIEVDNLVTDNISSNDSMESNNNKSTISSSTVNPAVFQGVFCRDLAAVGTLLSQVGFNRPIPVKYEALSC* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0534 592 MobiDBLite consensus disorder prediction 501 521 - -
Amo16g0534 592 MobiDBLite consensus disorder prediction 207 229 - -
Amo16g0534 592 CDD DnaJ 400 434 IPR001623 -
Amo16g0534 592 SUPERFAMILY TPR-like 250 345 IPR011990 GO:0005515
Amo16g0534 592 MobiDBLite consensus disorder prediction 212 227 - -
Amo16g0534 592 PANTHER - 1 592 - -
Amo16g0534 592 Gene3D Tetratricopeptide repeat domain 34 349 IPR011990 GO:0005515
Amo16g0534 592 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 592 - -
Amo16g0534 592 SUPERFAMILY Chaperone J-domain 396 434 IPR036869 -
Amo16g0534 592 Gene3D DnaJ domain 383 503 IPR036869 -
Amo16g0534 592 SMART tpr_5 284 317 IPR019734 GO:0005515
Amo16g0534 592 MobiDBLite consensus disorder prediction 97 118 - -
Amo16g0534 592 MobiDBLite consensus disorder prediction 97 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0534 Amo-Chr16 8740925 8743548 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0534 - - gmx:100808420 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0534 16 8740925 8743548 Amo09g0667 09 10807705 10808242 PCT
Amo09g0667 09 10807705 10808242 Amo16g0534 16 8740925 8743548 PCT