Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0520 ATGTCGTGGGCAATGAGATTCTCGGGGTTCTTCTCAGCCGCAATGCTGATGATAATCCTCTCCCCTTCCCTGCAATCTTTCCACCCAGCGGAGGCAATCCGATCTTCGCCGCATCTCGACGGTTACATCCGCCAGCCAGACCCACAGAACCGCTTCTCCTTCCGCAAGGCCTCTCCATTCCGCAATGCCGAGCAATGCCGTCCCAACAACCGCACCCTAACCACCGTCTGCGACCCTTCCCTTGTCCATGTTGCCTTAACCCTCAACCTCGAGTACCTCCGCGGCTCCATCGCCGCCGTCCACTCCATCCTCCAGCACTCTCTCTGCCCTGAGAACATCTTCTTCCATTTCCTTGTCTCCGACACCAATCTCGATTCCCTCGTTCAATCCACCTTCCCGCAGTTGAACTTCAAGGTATACTACTTCGATCCCAATATCGTTCGCAACCTGATCTCAACCTCCGTCAGGCAAGCCCTAGAGCAACCGCTAAATTACGCCAGAAATTACCTCGCTGACCTTCTCGAAACTTGCGTCAACAGAGTCATCTACCTCGATTCCGATCTGGTTGTCGTCGACGACATATCCAAGCTCTGGAGCACCAGCCTGGGCTCCAGGACCATCGGAGCACCCGAATACTGCCACGCCAACTTCAGCAAGTATTTCACGGCGGCGTTCTGGTCGGACCACCGCTTCGCGGGGACATTTGAAGGGCGCAGGCCCTGCTACTTCAACACGGGGGTGATGGTGATGGATCTGGTGAGGTGGAGGAGGGAAGGGTACACAAAGAGGATAGAGAGGTGGATGGAGGTTCAGAAGAGCGCACGGATCTACGAGCTCGGGTCTTTGCCGCCGTTCCTTCTGGTGTTCGCGGGACACGTGGCGCCCATCGAGCACCGGTGGAACCAGCATGGATTGGGAGGTGATAACGTTAAGGGAAGCTGCCGGGACCTCCACGCTGGCCCGGTGAGCCTCCTGCATTGGTCCGGCAGCGGGAAGCCCTGGGTCCGCCTCGATTCCAAGCGGCCTTGCCCCCTTGACGCTCTTTGGGCGCCGTTTGATTTGTACGGATACACTCACTGA 1080 0.575 MSWAMRFSGFFSAAMLMIILSPSLQSFHPAEAIRSSPHLDGYIRQPDPQNRFSFRKASPFRNAEQCRPNNRTLTTVCDPSLVHVALTLNLEYLRGSIAAVHSILQHSLCPENIFFHFLVSDTNLDSLVQSTFPQLNFKVYYFDPNIVRNLISTSVRQALEQPLNYARNYLADLLETCVNRVIYLDSDLVVVDDISKLWSTSLGSRTIGAPEYCHANFSKYFTAAFWSDHRFAGTFEGRRPCYFNTGVMVMDLVRWRREGYTKRIERWMEVQKSARIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVKGSCRDLHAGPVSLLHWSGSGKPWVRLDSKRPCPLDALWAPFDLYGYTH* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0520 359 PANTHER HEXOSYLTRANSFERASE 7 358 - -
Amo16g0520 359 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 7 358 - -
Amo16g0520 359 SUPERFAMILY Nucleotide-diphospho-sugar transferases 82 355 IPR029044 -
Amo16g0520 359 Pfam Glycosyl transferase family 8 83 336 IPR002495 GO:0016757
Amo16g0520 359 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 83 342 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0520 Amo-Chr16 8585898 8589190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0520 1 357 Glycosyltransferase AT3G62660 78.333 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0520 - - gmx:100809111 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0520 16 8585898 8589190 Amo16g0520 16 8585898 8589190 ECH