Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0481 ATGGCACGCGCCATGAAAATCTTCTCATTGATGGCAATCTGCGTGATGATGGTGGCACAGCAAGTTGCGGCAGTCGAGGAGGCAGCCGGGGCACCAAGCCATGGACCCCAGGGACCAGAACTGATCAAGTTTCTTTGCTCGATGTCACCAAAAAAGGATCTGTGCCTGAAAGTGTTGTTCTCTGACCCATCAGAGTTAGCCGGCGCAGGCCTGACCGACTTGGCAGTGGTGGCACTGAGGGCGGCGTCCCTGGACGCCTCCAGCATGCTGGACGACGTTACCAGATTCATCGATGATCCAGACATGAGCCCAGCCATCCAGCAGGGTTTGTCTGACTGCAAGGAGAACGTCTTGGACGCCGGAATGCAGCTGGATGATGCCGTTGCTTCCTTGTTGCAGGGTGCTGACAGAGACGCACACACCTGGCTCCGCGCTGCTTATGCCGCCATTGACACCTGCGATGCTTCTATTCCCGGAGATGATGATATTCTCTCCGTTAAGAGCAGGCAGCTCCGTACCCTTGTCGACCTTGCCACCGCCATCACCAATTTCTTGCCAAATAAGAACTTCCAAAACTAG 579 0.5527 MARAMKIFSLMAICVMMVAQQVAAVEEAAGAPSHGPQGPELIKFLCSMSPKKDLCLKVLFSDPSELAGAGLTDLAVVALRAASLDASSMLDDVTRFIDDPDMSPAIQQGLSDCKENVLDAGMQLDDAVASLLQGADRDAHTWLRAAYAAIDTCDASIPGDDDILSVKSRQLRTLVDLATAITNFLPNKNFQN* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0481 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 185 IPR035513 -
Amo16g0481 192 SMART PMEI_2 37 181 IPR006501 GO:0004857
Amo16g0481 192 Pfam Plant invertase/pectin methylesterase inhibitor 41 181 IPR006501 GO:0004857
Amo16g0481 192 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 183 IPR006501 GO:0004857
Amo16g0481 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 186 IPR035513 -
Amo16g0481 192 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 182 - -
Amo16g0481 192 PANTHER PECTINESTERASE 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0481 Amo-Chr16 8081973 8082827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0481 - - adu:107492430 354.755