Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0463 ATGGAGGGAATAGAACACACAAGAGTGGAAGTGAATGGCATCAACATGCATGTTGCAGTGAAAGGGCAAGGCCCGGTCGTGCTCTTCCTCCACGGCTTCCCAGAGCTCTGGTACTCCTGGCGCCACCAGATTCTCGCTCTCAGTCACAAAGGGTACCGCTGCGTGGCCCCCGATCTCCGCGGCTTTGGCGACACCGATGCTCCTGCTTCCGTGGACAGCTATAATTGTGTCCACGTTGTGAGTGACCTTGTTGCACTTATTCAGTCTCTTCAAGTCGAGAAAGTGTTCTTAGTGGGTCATGATTGGGGTGCAATCATCGGTTGGTACCTCTGCTTGTTTCGTCCTGAACTAGTCAAAGCTTATGTATGCCTCAGTGTACCTTTCTTCCGAAGAAACCCCATTGTTCCCACCGTTGACTCCATGCGTGCTCTCTATGGAGATGACTACTATATCTGCAGATTTCAGGAAGAAGGCAAAGTGGAAGCTGAGATGGCTCAAGTTGGGGCTGAGTATGCCATCAAGAACATGCTTACAAATCGCAGGACAGGTCCTCCAATATTCCCTAAGGGAGAGTATGGAACCGCTTTCAATCCTGATATGAAAGAAGACTTGCCTTCCTGGCTCACTCAACAAGATCTTGCTTATTTTGTCTCCAAATTCGAAAAGACAGGTTTCACCGGAGGATTGAATTACTATAGGAATTTTAACAAGAACTGGGAGCTGACGGCACCATGGAGTGGAGCGAAGATCAAAGTGCCGGTGAAATTCATAGCAGGTGAGTTGGACTCGGTATACACATCGTTAGGGATGGAAGATTATATTGAGAGTGGAGGTTTCAAGGAAGATGTGCCAGGTTTGGAGGAAGTCATTATTCAACCAGGAGTAGCTCACTTCAACAATCAGGAGACGCCACATGATATCACTAATCACATTTACAACTTCATTACCAAGTTCTGA 957 0.4754 MEGIEHTRVEVNGINMHVAVKGQGPVVLFLHGFPELWYSWRHQILALSHKGYRCVAPDLRGFGDTDAPASVDSYNCVHVVSDLVALIQSLQVEKVFLVGHDWGAIIGWYLCLFRPELVKAYVCLSVPFFRRNPIVPTVDSMRALYGDDYYICRFQEEGKVEAEMAQVGAEYAIKNMLTNRRTGPPIFPKGEYGTAFNPDMKEDLPSWLTQQDLAYFVSKFEKTGFTGGLNYYRNFNKNWELTAPWSGAKIKVPVKFIAGELDSVYTSLGMEDYIESGGFKEDVPGLEEVIIQPGVAHFNNQETPHDITNHIYNFITKF* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0463 318 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Amo16g0463 318 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Amo16g0463 318 PRINTS Epoxide hydrolase signature 97 110 IPR000639 GO:0003824
Amo16g0463 318 PRINTS Epoxide hydrolase signature 111 124 IPR000639 GO:0003824
Amo16g0463 318 PRINTS Epoxide hydrolase signature 252 268 IPR000639 GO:0003824
Amo16g0463 318 PRINTS Epoxide hydrolase signature 292 314 IPR000639 GO:0003824
Amo16g0463 318 PANTHER EPOXIDE HYDROLASE 1 318 - -
Amo16g0463 318 SUPERFAMILY alpha/beta-Hydrolases 2 317 IPR029058 -
Amo16g0463 318 Pfam alpha/beta hydrolase fold 25 172 IPR000073 -
Amo16g0463 318 PANTHER EPOXIDE HYDROLASE 1 318 - -
Amo16g0463 318 Gene3D alpha/beta hydrolase 1 318 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0463 Amo-Chr16 7461267 7462856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0463 1 318 Acyl Lipid Metabolism Gene Families AT4G02340 56.604 2.01e-134 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0463 - K08726 gmx:100812169 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0463 16 7461267 7462856 Amo16g0463 16 7461267 7462856 ECH