Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0446 ATGGTAAGCCTTGTGTTGTTTCTACTAATTGCTCTTTGTCCAGTTATTATGATCAAAGCATGGTCATTCAGTAAGCCACCATGTCCAAATTGCGGTGACCTTGCAGTTCCATATCCACTCAGCACCAACGATAATTGTGGCGACTCCAGATACAAAGTTTACTGCAACAATAACAAGTTAGAATTCTTGTCAGCCACAGGAAATTACTATAAGATCCTTAAAGTTGACCCTTGTAATAACAAGCTTGTTCTTCAACCACCCCTCATACTCAAAGAAACTTGTTATTCTTCTGATGTTGTTGATGGAGGGTTTCTCTTGGAACAAGACTTGCCCTTCAATATTTCTACACACAACACTGTCATGTTGTTGAATTGCTCTGAGAACATCCTTCTTTCCCCTCTCAACTGTTCCTCAAACAGTATATGTAGGGTGTTTGAGGATAAGGTTGAAGAGGGAAAAGGGTGTTTTGGTAAACTTTGCTGCCATTACTTGAAAGATTCAGCGATGAATTCTCATAAGATAAGAGTGAGGGTTGGAGGGTGCACAGCTTACACTTCCTTGGTTGATTGGAATCCTGATTCTCCTCCTGACTCTTGGAATTATGGGATTGAGCTTCAATGGTTGCCTGCACTTATTTGA 639 0.4053 MVSLVLFLLIALCPVIMIKAWSFSKPPCPNCGDLAVPYPLSTNDNCGDSRYKVYCNNNKLEFLSATGNYYKILKVDPCNNKLVLQPPLILKETCYSSDVVDGGFLLEQDLPFNISTHNTVMLLNCSENILLSPLNCSSNSICRVFEDKVEEGKGCFGKLCCHYLKDSAMNSHKIRVRVGGCTAYTSLVDWNPDSPPDSWNYGIELQWLPALI* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0446 212 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 15 210 - -
Amo16g0446 212 Pfam Wall-associated receptor kinase galacturonan-binding 28 83 IPR025287 GO:0030247
Amo16g0446 212 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 15 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0446 Amo-Chr16 7167901 7168882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0446 26 207 Receptor kinase-like Gene Family AT5G02070 39.894 2.18e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0446 - - cam:101515529 306.99