Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0442 ATGAGGGCAGGATCCATGATTTTTTCGTTAGTGCAAGTACCTAGGTGTAGAATACATGGCTTAGCAAATTATTGGGGTGAAACCTTTCATAGTTTGAGTAAGACTTGTGGAAACAATTCTAGTGTTAGGCTGCTTAGTTCTAGAATTTATGGGCTTCAAGGAGGGCAGAAAAGGAAGTGGACTCGAAGACCTATAACCACAAATACAGAAGGCACTGGGAGCACCAAATCAAGAAGTACCAAGCATGAAATTTTGAGTGAACCTATTTTAAAAAGTTTTACAGAAAATGTAAATAAAGAACAGGTAGTTGAATTCGACAATGTTCAATACTGTAACTTACAACAAGAGATTGCCCAGAATAAAGACTTGTCTAGCTTAGTCACAGTCATTACTTTTGATATTGAAACCACTGGATTCAGCAGAGAAAATGACCGGATCATTGAGATTGCACTTCGAGACCTTCAGGGTGGTGAGAACAGCACATTCCAAACTCTTGTAAATCCTGAACGCTGTGTTCCTAATTCACACATTCATCACATTACTACTCATATGGTGGACAGACCTGAGGTTCCAAGGATGCAAGAACTGATTCCCATCTTATTGCAATTTGTTCGAAGCCGTCAGAAACCTAGGGGATATGTGTTATGGGTTGCTCATAATGGTCGCGCTTTCGACTTTCCTTTCATCATGAACGAATTTAGGCGACATTCTACAGAGATTCCTCCTAATTGGCTGTTTGTAGACACCCTTCTTTTAGCACGAGAACTCATGAAGGCCAGAGGAACAAAATCAACCTCAATATCCCTTGGTACATTGTGTGAGCACTACAGAATCCATGTTGATGGCCAAGCTCATAGGGCTATGGTAGATGCTAACACATTGGCTCTGGTACTTCGTAGGTTAACCGGTGATCTGAAGTTGACCCTCTCTGACCTTGTTAAAAGATCATTCACAGCATTCGATATTATCAACTCCAAGAAGAAAAAGAATTCAGATTAG 999 0.4044 MRAGSMIFSLVQVPRCRIHGLANYWGETFHSLSKTCGNNSSVRLLSSRIYGLQGGQKRKWTRRPITTNTEGTGSTKSRSTKHEILSEPILKSFTENVNKEQVVEFDNVQYCNLQQEIAQNKDLSSLVTVITFDIETTGFSRENDRIIEIALRDLQGGENSTFQTLVNPERCVPNSHIHHITTHMVDRPEVPRMQELIPILLQFVRSRQKPRGYVLWVAHNGRAFDFPFIMNEFRRHSTEIPPNWLFVDTLLLARELMKARGTKSTSISLGTLCEHYRIHVDGQAHRAMVDANTLALVLRRLTGDLKLTLSDLVKRSFTAFDIINSKKKKNSD* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0442 332 CDD DEDDh 132 299 - -
Amo16g0442 332 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 3 329 - -
Amo16g0442 332 SMART exoiiiendus 128 307 IPR013520 -
Amo16g0442 332 MobiDBLite consensus disorder prediction 61 81 - -
Amo16g0442 332 SUPERFAMILY Ribonuclease H-like 126 308 IPR012337 -
Amo16g0442 332 MobiDBLite consensus disorder prediction 61 75 - -
Amo16g0442 332 Gene3D - 127 316 IPR036397 GO:0003676
Amo16g0442 332 Pfam Exonuclease 131 297 IPR013520 -
Amo16g0442 332 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 3 329 IPR040393 GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0442 Amo-Chr16 7103051 7105517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0442 - - gmx:100807346 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0442 16 7103051 7105517 Amo16g0442 16 7103051 7105517 ECH