Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0434 ATGGCAGAAGAGGCAGAGAACGAACGGAGGGTTCTGGTAGCAGTGGACGAAGGCGATGAGAGCATGTATGCCCTCTCATGGTGCCTCAACAACCTCGTCTTTTCCAAAAATACCCTTATCCTTCTCTATGTAAACCCACCACGTGGCGATTATATGCCCTTTGAAACCGCAGCCGCACTAGATGATCCTGAAATTCATCCAGCAAATCTGTATTCGCCGGAAATAACGGCAGCCATGGAAAGATATAGCCAAGAAGTGGCAGATTGCGTGTTAGCGAAAGCCAAGAAATTGTGTAAAGATCTCCAACACGTTAAGGTGGAGACGAAAGTAGAGGATGGCGATCCAAGGGACGTGATTTGTGAGATGGCTGAAAAGTTGGGTGCTCATGTTCTTGTTATGGGAAGCCACGGTTATGGTCTTATCAAGAGGACTTTTCTTGGAAGTGTGAGTAGTCACTGCGCACAGAACGTTAAGTGCCCAGTTCTCATAGTCAAGAAGCCAAAATCAATTGCTGATGCTCGAGATCAAACATATCAATCGGAATAA 546 0.4615 MAEEAENERRVLVAVDEGDESMYALSWCLNNLVFSKNTLILLYVNPPRGDYMPFETAAALDDPEIHPANLYSPEITAAMERYSQEVADCVLAKAKKLCKDLQHVKVETKVEDGDPRDVICEMAEKLGAHVLVMGSHGYGLIKRTFLGSVSSHCAQNVKCPVLIVKKPKSIADARDQTYQSE* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0434 181 Pfam Universal stress protein family 9 165 IPR006016 -
Amo16g0434 181 PANTHER OS05G0357525 PROTEIN 1 170 - -
Amo16g0434 181 Gene3D HUPs 3 176 IPR014729 -
Amo16g0434 181 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 170 - -
Amo16g0434 181 PRINTS Universal stress protein signature 8 26 IPR006015 -
Amo16g0434 181 PRINTS Universal stress protein signature 125 137 IPR006015 -
Amo16g0434 181 PRINTS Universal stress protein signature 143 165 IPR006015 -
Amo16g0434 181 CDD USP_Like 10 164 - -
Amo16g0434 181 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0434 Amo-Chr16 6956015 6960421 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0434 - - adu:107492166 257.299