Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0405 ATGGCTATTGCCTTTCCAATTCAGCGCTTCTACGATATTCCCATCTCTCTCTCCACCTGTTCCCCTCGCTGCATTTCAGGCCACTCTCAGGCTAAAGGTTTTGCAGTTCCACGGAGGAAAGCATTGTCCTTGTCCTTGTCCTTGCTCCTACCAACTTACATTCTCTCTGCCTCTGCTGCATTGGCTCAGCACTCCCCTGTGCTGCGCGAATACGTAGACTCATTTGATGGCTATTCATTCAGGTACCCCAGCAACTGGATCCAAGTGCGTGGTGCCGGTGCTGACATCTTCTTCAGAGACCCTTATGTTCTCGATGAAAACATATCTGTTGAGATCTCCTCTCCATCATCTTCCAGATACAAGACTGTTCAGGACTTGGGTTCACCCCAAGAAGCCGGCAAAAAGGTTCTCAAGCAATATCTCACTGAATTCATGTCTACCAGGCTTGGTGTTAGACGCGAATCCAACATCCTTTCCACCACTTCCAGAGTTGCTGATGATGGCAAGTTGTACTATCAAGTTGAGGTAAACATCAAGTCATATGCAAACAACAATGAGCTTGCTGTTATGCCACAAGAGCGGGTGGTACGCATGGAATGGGATCGGAGGTATCTTTCAGTACTTGGAGTTGAAAACAATCAACTCTATGAGTTGAGATTGCAAGTGCCAGAGAATGTCTTTACAGAGGAACAAAATGATCTTCGTCAAGTCATGGATTCTTTTCGTGTCAACAAGATTGCTGCTTAG 747 0.4632 MAIAFPIQRFYDIPISLSTCSPRCISGHSQAKGFAVPRRKALSLSLSLLLPTYILSASAALAQHSPVLREYVDSFDGYSFRYPSNWIQVRGAGADIFFRDPYVLDENISVEISSPSSSRYKTVQDLGSPQEAGKKVLKQYLTEFMSTRLGVRRESNILSTTSRVADDGKLYYQVEVNIKSYANNNELAVMPQERVVRMEWDRRYLSVLGVENNQLYELRLQVPENVFTEEQNDLRQVMDSFRVNKIAA* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0405 248 Pfam PsbP 68 243 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Amo16g0405 248 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 63 243 - -
Amo16g0405 248 SUPERFAMILY Mog1p/PsbP-like 69 243 IPR016123 -
Amo16g0405 248 PANTHER - 28 247 - -
Amo16g0405 248 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC 28 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0405 Amo-Chr16 6557147 6558641 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0405 - - adu:107473109 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0405 16 6557147 6558641 Amo16g0405 16 6557147 6558641 ECH