Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0403 ATGGATCTCAGCCAGCCTGCAGGTGAAAACTACGGCAATCCCATTACTTGCTTCTTTCACGTTTTCTTCAAGGGCGCAGCTTTGGCATTTTACATTGTATTTTCCATCTTTGTTGGTAACTTTGTCGTCATTTTCGTCGTCACTGCCCTTCTTGCTGCTCTTGATTTTTGGGTCGTCAAGAATGTAAGTGGCAGAATCTTAGTTGGTTTGAGGTGGTGGAATGAAATTGATGATCAGGGTGAGAGTGTTTGGAGATTTGAATGCCTCGATCAAGAGTCAATGGCTCGGTTGAACAAGAAAGATTCATGGCTTTTCTGGTGGACCCTTTACTTGAACGCAGGTATATGGCTTTTGTTGTCAATATTCTCGCTCATAAGGTTTGAAGCTGATTACATCCTAGTTGTAGGAGTTTGTTTGACTCTCAGTATTGCAAATATTGTTGGTTTCACCAAATGCAGAAAAGGTTTGCTACTCATTCATCTTCTTAAATTTGTGGGGCCATGGATATTGGCATTGAAAGAGGGATTCTCAACTCTGCTTCATCATGCATGTGAACTCAACGGATAA 567 0.4145 MDLSQPAGENYGNPITCFFHVFFKGAALAFYIVFSIFVGNFVVIFVVTALLAALDFWVVKNVSGRILVGLRWWNEIDDQGESVWRFECLDQESMARLNKKDSWLFWWTLYLNAGIWLLLSIFSLIRFEADYILVVGVCLTLSIANIVGFTKCRKGLLLIHLLKFVGPWILALKEGFSTLLHHACELNG* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0403 188 Pfam Eukaryotic protein of unknown function (DUF846) 13 152 IPR008564 GO:0016021
Amo16g0403 188 PANTHER GOLGI APPARATUS MEMBRANE PROTEIN TVP23 1 156 - -
Amo16g0403 188 PANTHER UNCHARACTERIZED 1 156 IPR008564 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0403 Amo-Chr16 6552743 6554571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0403 - - sspl:121809609 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0403 16 6552743 6554571 Amo16g0403 16 6552743 6554571 ECH
Amo16g0403 16 6552743 6554571 Amo19g1423 19 31254681 31257798 PCT
Amo19g1423 19 31254681 31257798 Amo16g0403 16 6552743 6554571 PCT