Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0399 ATGTCACTGTCTTTTTCTTCAGCCTCCGTAGCCTTATCTGAATGCTCAATCCCAATCCACCGTTGCTGCCATGCTCACCGAGTCACCGGCGGATCAAGAAGCTTGAGTTCAGTTACAGGAAGTGATCGCCTCGTACTGAATGTCAGAAATGGTAATTTGTGTCGGAAGTTTCGTGGTTTGAAACTATGGATACTGGAGAGGCTCAATTTTCAAATTCAACCAGCTAAGCTGCATAAGAGGTCAACGAATGGTAGTCAAGATAGAATTCATCACTTCAAGAACAATTTGGAAACAGGATCTTCACCCTCAATTACTCACACTCATGTTATTCCTCATGATAAGGTCAGTTCCATTTCCATGGATGTTAGTGGAGGACCCTCCCTTTGCATCGCCGTCATAGGAGCCACTGGTGAGCTCGCAAGGGGGAAGATTTTTCCGGCTTTATTCGCTCTCTATTATAGTGGCTTCCTTCCTCAGAATGTAGGAATTTTTGGGTATTCAAGGAAGGATATGACTGATGAGGACCTGCGATTCTGTATAGCCTCCACATTAACATGCCGAGTTGATCATCAAGAGAATTGTGGGGACAAGATGGATGCTTTCCTTAACCGAACTTATTATATTAATGGAGGGTATGACAACAAACATGGTATGTCCATGCTGAATGCCCGAATGGAGCAGATCGAGGGAGGATCCAAAGCCAACAGGATATTCTACCTTTCCGTGCCACAAGAAGCACTTTTGGATGTTGCATCATGTCTTGCTAGCAGTGCTCAGACCCAAAGTGGATGGAATCGCATTATAATTGAGAAGCCATTTGGCTTCGATGTACTTTCTTCCCATAGGTTGACACAATCTCTCCTTTCAAAGTATGAGGAAAAGCAAATATACAGGATTGATCATCTTCTGGGAAGGAATCTCATAGAAAATCTCACAGTTTTAAGGTTTGCAAATCTTGTCTTTGAGCCACTCTGGAGCCGTACTTACATACACAATATACAGATCATTTTATCAGAGGAATTGGGCGTGCAGCCTGGAAGGTATTTTAGTGGCTATGGGATTATCCGTGATATTGTTCACAGTCATGTACTTCAAACAATTGCGTTGCTTGCCATGGAACCACCAATAAGCCTTGATGGCGAAGATATTCGAAATGAAAAGGTCAAGGTACTCAGGTCAATTCGCAAATTGGAGCCTAGAGATGTGATTCTTGGCCAGTATAAAGCAAGTAGCAAAGACAAAGTTGATGTATGCGTAAATGGTCTGACACCCACTTATTTTGCTGCTGCAATGTACATTGATAATGCACGATGGGATGGCGTGCCATTTTTGGTTAAAACAGGCTTTGGACTCATCAAACACCAAATGGAGATACGGATTCAATTTCGTCATGTGCCAGGAAATGTTTATGACGAATCCATCGGGCATAATATTGACCGTGCCGCGAATGAGCTCATTCTTCGTGATGTTCCCGATGAAGCTATCCTGGTGAAAGTTAACAACAAGATTCCAGGACTGGGGTTACAATTGGACTCTTCAGAGTTGAATCTGCTCTACAAGGACAAGTATAACATGGAGGTGCCGGATTCATATGAGCATCTTCTGCTTGATGTCATTGATGGGGATAACCATCTCTTTATGAGAAGTGATGAGCTGGCAGCTGCGTGGAACATTATAAGTCCAATTCTGAATGAGATGGACAAGGACAACATGTCACTGGAGCTTTATGAATTGGGGGGTCGTGGTCCTGTTGGAGCATACTACCTCTGGGCTAAGCATGGTGTTCGTTGGGTGGAGGACTAA 1803 0.4354 MSLSFSSASVALSECSIPIHRCCHAHRVTGGSRSLSSVTGSDRLVLNVRNGNLCRKFRGLKLWILERLNFQIQPAKLHKRSTNGSQDRIHHFKNNLETGSSPSITHTHVIPHDKVSSISMDVSGGPSLCIAVIGATGELARGKIFPALFALYYSGFLPQNVGIFGYSRKDMTDEDLRFCIASTLTCRVDHQENCGDKMDAFLNRTYYINGGYDNKHGMSMLNARMEQIEGGSKANRIFYLSVPQEALLDVASCLASSAQTQSGWNRIIIEKPFGFDVLSSHRLTQSLLSKYEEKQIYRIDHLLGRNLIENLTVLRFANLVFEPLWSRTYIHNIQIILSEELGVQPGRYFSGYGIIRDIVHSHVLQTIALLAMEPPISLDGEDIRNEKVKVLRSIRKLEPRDVILGQYKASSKDKVDVCVNGLTPTYFAAAMYIDNARWDGVPFLVKTGFGLIKHQMEIRIQFRHVPGNVYDESIGHNIDRAANELILRDVPDEAILVKVNNKIPGLGLQLDSSELNLLYKDKYNMEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWNIISPILNEMDKDNMSLELYELGGRGPVGAYYLWAKHGVRWVED* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0399 600 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 127 599 IPR001282 GO:0006006|GO:0016614|GO:0050661
Amo16g0399 600 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 313 597 IPR022675 GO:0004345|GO:0006006|GO:0050661
Amo16g0399 600 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 132 310 IPR022674 GO:0006006|GO:0016614|GO:0050661
Amo16g0399 600 Gene3D Dihydrodipicolinate Reductase; domain 2 299 599 - -
Amo16g0399 600 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 90 600 IPR001282 GO:0006006|GO:0016614|GO:0050661
Amo16g0399 600 PANTHER INACTIVE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 4, CHLOROPLASTIC 90 600 - -
Amo16g0399 600 Gene3D - 126 298 - -
Amo16g0399 600 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 300 598 - -
Amo16g0399 600 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 126 313 IPR036291 -
Amo16g0399 600 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 128 598 IPR001282 GO:0006006|GO:0016614|GO:0050661
Amo16g0399 600 PRINTS Glucose-6-phosphate dehydrogenase signature 341 358 IPR001282 GO:0006006|GO:0016614|GO:0050661
Amo16g0399 600 PRINTS Glucose-6-phosphate dehydrogenase signature 266 279 IPR001282 GO:0006006|GO:0016614|GO:0050661
Amo16g0399 600 PRINTS Glucose-6-phosphate dehydrogenase signature 359 375 IPR001282 GO:0006006|GO:0016614|GO:0050661
Amo16g0399 600 PRINTS Glucose-6-phosphate dehydrogenase signature 290 318 IPR001282 GO:0006006|GO:0016614|GO:0050661
Amo16g0399 600 PRINTS Glucose-6-phosphate dehydrogenase signature 437 463 IPR001282 GO:0006006|GO:0016614|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0399 Amo-Chr16 6491012 6495051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0399 K00036 - gmx:100796541 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0399 16 6491012 6495051 Amo16g0399 16 6491012 6495051 ECH