Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0350 ATGTCATCAAAAAGATTGCTTTCTGGAATAATGGAGAAAAATGAAGAAAGGGGTATTAACATGTCCCTCATGGATTTGCCTGAGGCCACTTTGGATTGCATTCTAAAATGGCTGTCACCAATTGAACTGTGTGTTATGTCAATGGTATGTGCTTCTTTGAGGGATAGGTGTGGAAGCAACCATTTATGGGAAAAACACATGGAATTCAAATGGGGTAGAGTCATTGGAGAAGTTGCTTACAAAGAGTGGCAATGTCACATTAGAAAAGCAAAGGAAGGAACACTCTTGGGTGATTATTTCACCAATCTTAATGGATCTTTGGGATCACTTAGTGGCACTTGGCCTGATTTGTACCTTGGTTCTTACTTAGAAGATTGTGGCAATCTCAATGGTCAATTTTCAAACAAGTTCATGAAGGCCTTGTATTTCTCTTTAGAGACCGGAAGGTTCTGGTTCCCTGCTCAATTCTACAAGGGATTGACAATTTACAATGCCTTGTTTAGCTATGATTCCAAATCTGATATCTTTCAAGCAAGGCAACATAATGGTGGTTGGAGGTTTCTAGGAAAAAATATTGGGTGGGATATGGTGAGAATTCCTCCGATTGAAACTCCTCCCTATACTCTTCATATCACTGACTGTTTTTACGACTTAAAACCGGGTGATCACGTTGAGATTCAACGAAGAGGAATTACAGAAACTCATTATGGTATGGTGTTATTGGCCACATGGAATCATGTAATGGGAATGAGAATTATTGCCAGTGTCAACACAACGGAATTGGTGGTGGAGTTCAAGCAGTACCCTGAAGCATCATACATGAGAAAAATAGTCCTAAACAGAAGGAATTCAGGGGAACAAGGAAGCAGAGCCACTGGTTTCTTTGGTGGAATTAGAAAGCTCCACAATCACCATGATATTCATTTATGGAACAACCGCCTCACGGCACAAGCCCTCCAAATGATGGAGCCTAGACTACACTATGCACCTCCAGTAGAAGCACAGTATCCTGTCCATGGCCATCAGTAG 1029 0.4111 MSSKRLLSGIMEKNEERGINMSLMDLPEATLDCILKWLSPIELCVMSMVCASLRDRCGSNHLWEKHMEFKWGRVIGEVAYKEWQCHIRKAKEGTLLGDYFTNLNGSLGSLSGTWPDLYLGSYLEDCGNLNGQFSNKFMKALYFSLETGRFWFPAQFYKGLTIYNALFSYDSKSDIFQARQHNGGWRFLGKNIGWDMVRIPPIETPPYTLHITDCFYDLKPGDHVEIQRRGITETHYGMVLLATWNHVMGMRIIASVNTTELVVEFKQYPEASYMRKIVLNRRNSGEQGSRATGFFGGIRKLHNHHDIHLWNNRLTAQALQMMEPRLHYAPPVEAQYPVHGHQ* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0350 342 PANTHER ESTS AU081301(E20138) 20 318 - -
Amo16g0350 342 SMART fbox_2 26 66 IPR001810 GO:0005515
Amo16g0350 342 Gene3D - 7 118 - -
Amo16g0350 342 PANTHER CYCLIN-LIKE F-BOX 20 318 - -
Amo16g0350 342 ProSiteProfiles F-box domain profile. 20 66 IPR001810 GO:0005515
Amo16g0350 342 Pfam F-box domain 25 64 IPR001810 GO:0005515
Amo16g0350 342 SUPERFAMILY F-box domain 9 74 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0350 Amo-Chr16 5408485 5422280 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0350 - - adu:107492603 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0350 16 5408485 5422280 Amo16g0350 16 5408485 5422280 ECH