Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0331 ATGCCTGGCGACGATTTCTCGGTGGTGGTTCTGGCGTCGGATCTCGCCGTTGACGCCAGACCCTTCTTATCCCATAAAGACCATGAAGAAGAAGAAGAAGAGGACAGCTGGGACGATTGTTCTCAATACCTCTCCCCCGACGAAGACTTCTTCGATCTCGATATGTTGCAGTTTCTCCGCCGTCAGGGCTCCGACAAGAACGGACATCCCATCCTCCGTATCGTCGGCAAGTACTACCCTGCCACTGTTGTGAACCCAGAGAGACTGAAGAGGTATGTTCTCCACAAAATTTGCAGCGAGATGCAAGAAGGGCCCTTCTGTGTTGTATACATGAATAGCAGTGTTCAACAGGAGGACAACTCCCCTGGCATAACCATCTTGAGGTGGATTTACGAAGAACTTCCTGCTGATTTTAAGGATAGGCTTCAAACCGTGTATTTTATCCACCCCGGGCTTCGTTCTAGGATACTCATTGCTACATTTGGCCGGTTTTTCTTGAGTGGAGGATTGTATTGGAAGATCAAGTATGTAAGCCGGCTTCAATATCTTTGGGATGATATTAAGAAAGGAGAGATTGAGATTCCGGAGTTTGTAAAGAGCCACGATGATGTTCTGGAGCATAGACCGCTCACAGATTACGGCATTGAGCCTGATCCTTTTCAACTCACCGGGATTCCTTCTGCCAGCTTTTCATTCGGCAAGTATGAGGAGAGATGGGCAGGAAGGGACTATGTGTCTTAG 741 0.4818 MPGDDFSVVVLASDLAVDARPFLSHKDHEEEEEEDSWDDCSQYLSPDEDFFDLDMLQFLRRQGSDKNGHPILRIVGKYYPATVVNPERLKRYVLHKICSEMQEGPFCVVYMNSSVQQEDNSPGITILRWIYEELPADFKDRLQTVYFIHPGLRSRILIATFGRFFLSGGLYWKIKYVSRLQYLWDDIKKGEIEIPEFVKSHDDVLEHRPLTDYGIEPDPFQLTGIPSASFSFGKYEERWAGRDYVS* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0331 246 Gene3D - 47 193 IPR036865 -
Amo16g0331 246 SUPERFAMILY CRAL/TRIO domain 61 191 IPR036865 -
Amo16g0331 246 CDD SEC14 47 195 IPR001251 -
Amo16g0331 246 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 3 245 - -
Amo16g0331 246 Pfam Divergent CRAL/TRIO domain 68 203 IPR001251 -
Amo16g0331 246 SMART sec14_4 47 203 IPR001251 -
Amo16g0331 246 PANTHER OS01G0948300 PROTEIN 3 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0331 Amo-Chr16 5116680 5118354 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0331 - - gmx:100810365 419.468