Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0321 GACAACATTAATTTTAGTATAATCCAACTCCGAATCAAACGCTTCAAAAGATTCCAACTTTCCATCATGATTTCTTCATCCATCTCTCTCAGACCCTTCCTTCACTCCCTTGTCCTTCATCACCACCATCAGAGAACAACTGCTTCAAACAGTTGGGCCTGCTTGGCTTTTGAGAATTCAGCAAATTTCGGCACACAGAGAGTGATTTTTGCAAAGGGTTTCAGGCTGAATTGCTTGGTTGATAAAGTGATGGATGGGACCACATCATCTTTGGTGAATGATGCAGTGGATTGTTTTGCTGAAGAGGAAATTTTGGAGCCTAATATCTCAACATTGGTTATGAATTTCGAGAATAAGTCTGATCCTTTTGGAGCAGTCAGTAATCCGCTCTATCAGACTGCTACTTTTAAGCAGCCTAATGCAATAGAAAATGGTCCCTATGATTATACCAGAAGTGGAAATCCCACTCGAGATGCTTTAGAAAGTTTGTTGGCGAAACTTGATAAGGCGGATAGAGCCCTATGCTTCACCAGTGGAATGGCTGCTCTGAGTGCTGTTTCTCATCTTGTTCAAGCTGGTGAGGAAATTGTTGCTGGAGATGATCTATATGGTGGAACAGACAGGTTGCTGTCCCGAGTAACTCCAAAGCATGGCATTGTGGTCAAACGGGTAAATACAACTGATCTTAATGAGGTTGCATCTGCTATTGGACCCCGGACTAAGCTTGTGTGGCTTGAGAGCCCAACCAATCCTCGAATACAAATTACTGATATTCGAAAAATATCTGAGATGGCTCATGCACATGGTGCTCTGGTGTTGGTGGATAATAGTATAATGTCACCTGTGTTGTCTCGGCCATTAGAACTTGGAGCAGATATTGTTATGCACTCAGCTACCAAATTTATTTCTGGACATAGCGATATTATGGCTGGTGTGCTTGCTGTGAAAGATGAAAGGTTGGGAAAAGAGTTATATTTCTTGCAAAATGCAGAGGGTTCAGGCTTGGCTCCATTTGACTGTTGGCTCTGTATGCGAGGAATCAAGACGATGTCCCTGCGAGTTGAGAAACAACAGGATAATGCTCAGAAGATTGCCGAGTTCCTTGCCTCCCATCCTCTAGTGAAGAAAGTAAACTATGCTGGTCTGCCTGGTCATCCTGGACACGATTTACACTACTCGCAGGCAAAAGGTGCAGGATCTGTGCTTAGCTTTTTAACAGGTTCCCTGGCACTCTCAAAGCATATTGTTGAAACTACCAAGTACTTCAGCATAACTGTCAGTTTCGGAAGTGTGAAGTCCCTCATCAGTTTGCCGTGTTTCATGTCGCACGCAAGCATACCATCGGTGGTTCGTGAAGAAAGAGGCTTAACCGAAGATCTAGTGCGCATATCTGTGGGGATTGAGGATGTGAATGATCTCATTTCTGATCTAGACAATGCCCTTAGAACTGGCCCTGTGTAA 1461 0.4367 DNINFSIIQLRIKRFKRFQLSIMISSSISLRPFLHSLVLHHHHQRTTASNSWACLAFENSANFGTQRVIFAKGFRLNCLVDKVMDGTTSSLVNDAVDCFAEEEILEPNISTLVMNFENKSDPFGAVSNPLYQTATFKQPNAIENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALSAVSHLVQAGEEIVAGDDLYGGTDRLLSRVTPKHGIVVKRVNTTDLNEVASAIGPRTKLVWLESPTNPRIQITDIRKISEMAHAHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFISGHSDIMAGVLAVKDERLGKELYFLQNAEGSGLAPFDCWLCMRGIKTMSLRVEKQQDNAQKIAEFLASHPLVKKVNYAGLPGHPGHDLHYSQAKGAGSVLSFLTGSLALSKHIVETTKYFSITVSFGSVKSLISLPCFMSHASIPSVVREERGLTEDLVRISVGIEDVNDLISDLDNALRTGPV* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0321 486 SUPERFAMILY PLP-dependent transferases 117 482 IPR015424 -
Amo16g0321 486 TIGRFAM cysta_beta_ly_E: cystathionine beta-lyase 110 483 IPR006238 GO:0004121|GO:0071266
Amo16g0321 486 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 61 486 IPR000277 GO:0019346|GO:0030170
Amo16g0321 486 CDD CGS_like 124 482 IPR000277 GO:0019346|GO:0030170
Amo16g0321 486 Pfam Cys/Met metabolism PLP-dependent enzyme 111 481 IPR000277 GO:0019346|GO:0030170
Amo16g0321 486 Gene3D - 108 350 IPR015421 GO:0003824
Amo16g0321 486 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 292 306 IPR000277 GO:0019346|GO:0030170
Amo16g0321 486 PANTHER BNAC04G24570D PROTEIN 61 486 - -
Amo16g0321 486 Gene3D Aspartate Aminotransferase, domain 1 351 484 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0321 Amo-Chr16 5064778 5068830 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0321 K01760 - gmx:100812354 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0321 16 5064778 5068830 Amo16g0321 16 5064778 5068830 ECH