Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0288 ATGAACCCTTCTGGCAATGGCAGTGCTACTGTTGTTGTTATGGTTGTGGATTGTGTTGATTTTGATGGTTCTTTCCCTAGGACGGCAGCAAAATCGTTGTTTAAGGCATTGGAAAGAATCCAGGATGACTCGAAGAAGGGTAAGAAACTGCCAAAGCTAGTTCTTGTGGCTACAAAGGTTGATCTCCTTCCATCAGAGGTTTCCCCTGCAAGGTTAGATAGATGGGTTAGACACCGAGCAAGTGCTGCAGGAGCACCTAAACTAAGTGCAGTTTATCTTGTAAGTTCTCGAAAGGATTTAGGTGTAAGGAATCTGTTGTCCTTCATAAAGGACTTGGCAGGTCCTCGTGGGAATGTGTGGGTGATTGGGTCTCAGAATGCGGGGAAGTCTACTCTAATCAATGCATTTTCAAAGAAACACGGAGCTAAAGCTACAAAGCTCACAGAAGCTCCGATTCCTGGGACAACACTTGGGATCTTGAGAATTGGAGGAATTTTGTCCGCTAAGACTAAGATGTTTGACACTCCAGGGCTCCTGCATCCCTATTTAATGTCGATGAGACTGAACAGAGAAGAGCAAAAGATGGTTGAGATACGGAAGGAACTTCGACCTCGATCATATAGAATCAAGGTAGGGCAGGCAGTGCACATTGGTGGCTTGACAAGAATTGACCTTATTGAAGCCTCTGTTGAAACAATATATGTGACCGTTTGGGCATCACCAAATGTTTCTCTTCACATGGGAAAAGTAGAAAATGCTGAAGAGGTTTGGAGAATCATGTTGGTGTCAGGTTGCAGGTAA 801 0.4432 MNPSGNGSATVVVMVVDCVDFDGSFPRTAAKSLFKALERIQDDSKKGKKLPKLVLVATKVDLLPSEVSPARLDRWVRHRASAAGAPKLSAVYLVSSRKDLGVRNLLSFIKDLAGPRGNVWVIGSQNAGKSTLINAFSKKHGAKATKLTEAPIPGTTLGILRIGGILSAKTKMFDTPGLLHPYLMSMRLNREEQKMVEIRKELRPRSYRIKVGQAVHIGGLTRIDLIEASVETIYVTVWASPNVSLHMGKVENAEEVWRIMLVSGCR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0288 266 CDD YqeH 52 178 - -
Amo16g0288 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 228 IPR027417 -
Amo16g0288 266 Pfam 50S ribosome-binding GTPase 119 194 IPR006073 GO:0005525
Amo16g0288 266 Gene3D - 6 181 IPR027417 -
Amo16g0288 266 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 1 258 - -
Amo16g0288 266 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0288 Amo-Chr16 4367142 4368202 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0288 - - aip:107623624 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0288 16 4367142 4368202 Amo16g0288 16 4367142 4368202 ECH