Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0278 ATGGCTCAGTCCTTTTCAACTGTGAAATGTTCTTCCATGCCTTCTACCATTCTCTGCTCATTATTAGTGCTACTAATTGCTGGCACGGCCACAACAGAAGCAACAGGTGTATGCTATGGAAACATGGGAAGCAACTTGCCATCGGCACAAGAAGTGGTTGCACTCTACAAACAATATAACATTCCAAGGATGCGAATCTACGCTCCAGACCAGAATGTTCTAGAAGCCCTTCGCGGCTCCAACATCGAGCTCTTCATGGACATTCCAAAGGAAAATCTAGCACCCTTAGCAGCCACCCAGGACAACGCCAACCAATGGGTCCAGCAATACGTAAGAAACTATGGAAATGGAAATGTGAGGTTCAGATACATCTCCGTTGGAAACGAAGTCAAACCAAATGAAATTTATGCGCAGTATGTGGTGCCCGCCATGAACAACATCCAGAATGCTCTAAATGCTGCTGGACTTGGTAACCAGATCAAGGTTTCCAACACCATTGAGACCGGTGCTTTAGGACAATCCTACCCTCCATCGCAGGGTTCCTTTAATGCTAATTACAGAGCCGCATATCTTGATGGTGTTATAAGGTTCTTGGTGAATAACCGATCACCGTTGCTTGTGAATGTGTACCCTTACTTTAGCTACTTCTTCAACCAAAGAGACATTCGTCTAGACTACGCACTTTTCACCGCTCCTTCTGCTTTGGTCACCGATGGCTCCCTACATTACCAGAACCTCTTCGATGCAATCGTCGACGCCACGTATTCCGCGTTGGAGAAAGCCGGCGGAGGCTCCCTGGAGATAGTTGTGGCGGAAACTGGATGGCCCTCCGACGGCGGTGTGGCCACTTCACTGGACAACGCAAGGACTTATAACACCAAGTTGGTTGAGCATGTGAAGCTTGGGACTCCAAAGAGGCCTGGCAGACCCATTGAGACCTATGTTTTTGCCATGTTTGATGAGAATAATAAGAACCAGTCACCGCCGCCATATACTTATGAGAAATTTTGGGGGCTCTTCCTTCCAAATAAACAGCCCAAGTACCCTATTAATCTCAATTAG 1062 0.4708 MAQSFSTVKCSSMPSTILCSLLVLLIAGTATTEATGVCYGNMGSNLPSAQEVVALYKQYNIPRMRIYAPDQNVLEALRGSNIELFMDIPKENLAPLAATQDNANQWVQQYVRNYGNGNVRFRYISVGNEVKPNEIYAQYVVPAMNNIQNALNAAGLGNQIKVSNTIETGALGQSYPPSQGSFNANYRAAYLDGVIRFLVNNRSPLLVNVYPYFSYFFNQRDIRLDYALFTAPSALVTDGSLHYQNLFDAIVDATYSALEKAGGGSLEIVVAETGWPSDGGVATSLDNARTYNTKLVEHVKLGTPKRPGRPIETYVFAMFDENNKNQSPPPYTYEKFWGLFLPNKQPKYPINLN* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0278 353 Gene3D Glycosidases 34 353 - -
Amo16g0278 353 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
Amo16g0278 353 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG3-RELATED 27 350 - -
Amo16g0278 353 Pfam Glycosyl hydrolases family 17 36 351 IPR000490 GO:0004553|GO:0005975
Amo16g0278 353 SUPERFAMILY (Trans)glycosidases 36 351 IPR017853 -
Amo16g0278 353 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 27 350 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0278 Amo-Chr16 4226337 4228707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0278 31 352 Glycoside Hydrolase AT3G57270 61.180 3.04e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0278 - - ahf:112695988 698.353