Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0270 ATGTCTTCAAAACATGTTATTATTGTTATTATTACTCATCTATTTACAAAATTCTTAAAGACTTTCTTACTCCTTATTAGTTTCATACTCCACAAAGCAGATTCCGGCTACAACAACAATTCTATTGGAACATCAATATTCCAACGACCTTATCATTATGATCAGATTGTATCTTCGTTGCAGAAACTCCCTCTAGAAGGCTCCTTAAGCTTAAGTAACAACGACGCGGTCGCCAGTGACTTTGGAAACATATACCATTTCCCTCCTCTAGCAGTCCTTAACCCGGTATCAGTATCCGACATATCACGTGCCATAAAGCACGTGATGGAGTTATCTGAACCGGGTCTGAAGGTCGCTGCTAGAGGACACGGACATTCCCTCCAAGGGCAGTCACAAGCAGAAGGAGGCATAGTGATCAACATGGAGTCACTGGCTGAAAAAACAGCAGCAGTAGTGGTAGTTAACAATGGAGAATTTGTTCCATATGTGGATGTTTCAGCGGGTGAGTTATGGATTAACATTCTGCATGAGACTCTTAAGCATGGTTTAGCACCAAAATCTTGGACGGATTATCTTCATCTCACTGTTGGTGGAACTCTATCAAATGCTGGAATAAGTGGTCAAGCTTTCAGGCATGGACCCCAGATCAATAACGTCTTTCAGCTTGAAGTTGTTACAGGGAAAGGAGAGGTGGTTACATGCTCAGAGACAAGAAACACAGAGCTTTATTACAGTGTTCTTGGAGGGCTTGGCCAATTTGGAATCATCACTAGGGCAAGGATTTCTCTTGAAGCAGCACCTAAGATGTTTTCAATGTTTGCAAGGGACCAAGAGCATTTGATATCTCTTGAGAACACATTTGATTATATTGAAGGATTTGTGATCATAAATAGAACTGGGATCCTTAATAATTGGAGATCTTCTTTCAACCCCAGAGACCCAATTCAGGCCAGCCAATTCATTTCAGATGGAAGAACCTTCTATTGTCTTGAGGTGGCAAAATATTTCAACCCAGATGAATCTCAATTCATGAATCAGATAGTTGAGAATTTGTTGTCAGAGCTGAGTTACATTCCATGGACACTCTTCCAATCAGAAGTTTCTTACGTGCAATTTTTAGATAGAGTGCATGTTTCTGAGAAACAGTTAAGATCAAAGGGATTATGGGAAGTTCCACACCCTTGGCTAAACCTTCTAATTCCAAGGACTCACATTCATCACTTTGCTCAAGAGGTCTTTGGCAATATCCTCAAAGACACAAGCAATGGCCCCATACTCATCTATCCTGTCAACCAAACACGGTGGAACAGGAAAACATCTTTGGTAACGCCAGAGGAGGATATATTTTACCTAGTGGCATTTTTATCTTCAGCAATGCCATTAGCAAGAGGCTCAGAGAGCTTAGAACACATCCTAACACAAAACAAAAGGATCCTAGAATTTTGCACAAATGCCAAGCTTGGAGTGAAGCAGTATCTCCCACATTACACCACACAGGAAGAGTGGAAAGCACACTTTGGATCAAAATGGGAAGCATTTGTGCAAAGAAAAACAGCATATGACCCACTAGCACTGCTTGCCCCTGGCCAGAGAATCTTTCAAAAGGCATTGTCTACCTCTTGTTAG 1626 0.4127 MSSKHVIIVIITHLFTKFLKTFLLLISFILHKADSGYNNNSIGTSIFQRPYHYDQIVSSLQKLPLEGSLSLSNNDAVASDFGNIYHFPPLAVLNPVSVSDISRAIKHVMELSEPGLKVAARGHGHSLQGQSQAEGGIVINMESLAEKTAAVVVVNNGEFVPYVDVSAGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQINNVFQLEVVTGKGEVVTCSETRNTELYYSVLGGLGQFGIITRARISLEAAPKMFSMFARDQEHLISLENTFDYIEGFVIINRTGILNNWRSSFNPRDPIQASQFISDGRTFYCLEVAKYFNPDESQFMNQIVENLLSELSYIPWTLFQSEVSYVQFLDRVHVSEKQLRSKGLWEVPHPWLNLLIPRTHIHHFAQEVFGNILKDTSNGPILIYPVNQTRWNRKTSLVTPEEDIFYLVAFLSSAMPLARGSESLEHILTQNKRILEFCTNAKLGVKQYLPHYTTQEEWKAHFGSKWEAFVQRKTAYDPLALLAPGQRIFQKALSTSC* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0270 541 SUPERFAMILY FAD-binding/transporter-associated domain-like 76 263 IPR036318 GO:0050660
Amo16g0270 541 PANTHER GULONOLACTONE OXIDASE 10 538 - -
Amo16g0270 541 Gene3D - 269 492 IPR016170 -
Amo16g0270 541 Pfam FAD binding domain 89 235 IPR006094 GO:0050660
Amo16g0270 541 Gene3D - 75 533 IPR016167 -
Amo16g0270 541 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 89 125 IPR006093 GO:0016491
Amo16g0270 541 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 10 538 - -
Amo16g0270 541 SUPERFAMILY FAD-linked oxidases, C-terminal domain 269 533 IPR016164 GO:0003824|GO:0050660
Amo16g0270 541 Gene3D - 141 268 IPR016169 -
Amo16g0270 541 ProSiteProfiles PCMH-type FAD-binding domain profile. 85 266 IPR016166 GO:0071949
Amo16g0270 541 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 269 533 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0270 Amo-Chr16 4098154 4100765 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0270 K00279 - gmx:100777568 776.163