Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0257 ATGAGTACACATGCTTCTTACAACATGAGATCCAAATCATACTATGAAAATGATATCAAAGGAACAATGAAAGATATTGGGGGTGGGAAGATGGTGTCTTCCGGAACAACAACAGCAACGGGCAGCAAGGAGAATTTCTTCATCTTCTCCCTTGTGAGCCTTTGGTATTCGTCAAACATTGGTGTGATCCTTCTCAACAAGTATCTTCTCTCAAACTATGGATTCAAGTTCCCAATTTTCCTCACAATGTGCCACATGTCAGCGTGCGCGGTTCTCAGCTACATTTCCATTGTGTTCTTCAAAGTTGTGCCTCAGCAGATGATCAAATCCAGGTCCCAGTTCATGAAGATTGCAACTTTGAGCATTGTTTTTTGTGGGTCTGTTGTTGGAGGAAACATCTCTCTTAGGTATTTGGCTGTTTCTTTCAATCAAGCTGTTGGGGCGACCACGCCTTTCTTCACGGCTGTTTTTGCGTACCTTGCAACGCTCAAGAGAGAGGCTTGGGGCGAGCCGGGCTTTCACTTATTTGGATTCATCATGTGCCTAAGTGCTACTGCTGCGAGAGCTTTCAAGTCTGTTCTTCAGGGCATTTTACTTTCTTCTGAAGGGGAAAAGCTGAACTCAATGAACTTGCTCTTGTATATGTCGCCGATTGCTGTCATAATTTTGTTGCCGGCGGCGCTTATCATGGAGCCTAATGTTGTAGATGTCACAATATCACTTGGAAGCGAAAACAAAACTATGTGGCTACTTCTTTTGCTGAATTCAGTCACAGCATATTCCGCTAACTTAACAAACTTCTTGGTCACTAAACATACAAGTGCTCTTACACTCCAGGTGTTAGGCAATGCAAAAGGTGCTGTAGCTGTTGTTATCTCAATACTGCTATTCAGAAACCCGGTGACCGTTCTTGGCATGGCTGGCTACACAGTAACAGTCATGGGAGTAGCTGCATATGGAGAAACAAAGAGGAGGTTTAGATGA 984 0.437 MSTHASYNMRSKSYYENDIKGTMKDIGGGKMVSSGTTTATGSKENFFIFSLVSLWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACAVLSYISIVFFKVVPQQMIKSRSQFMKIATLSIVFCGSVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYLATLKREAWGEPGFHLFGFIMCLSATAARAFKSVLQGILLSSEGEKLNSMNLLLYMSPIAVIILLPAALIMEPNVVDVTISLGSENKTMWLLLLLNSVTAYSANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTVLGMAGYTVTVMGVAAYGETKRRFR* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0257 327 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN-RELATED 40 168 - -
Amo16g0257 327 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN-RELATED 169 326 - -
Amo16g0257 327 PANTHER SOLUTE CARRIER FAMILY 35 40 168 - -
Amo16g0257 327 PANTHER SOLUTE CARRIER FAMILY 35 169 326 - -
Amo16g0257 327 Pfam Triose-phosphate Transporter family 170 319 IPR004853 -
Amo16g0257 327 Pfam Triose-phosphate Transporter family 50 160 IPR004853 -
Amo16g0257 327 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0257 Amo-Chr16 3864903 3867893 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0257 38 327 Organic Solute Cotransporters AT5G04160 75.000 2.01e-170 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0257 - - gmx:100797956 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0257 16 3864903 3867893 Amo16g0257 16 3864903 3867893 ECH