Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0253 ATGGCATCATCCAGCTGCCAAACATCACCAACTGCCACTAACTACAACTCCACCACAAAAGCCCACCACCAGGCCCAAAAGGCCCACCACCAACACGATGTCGTCGTGGTGGTGGTTCCATTCCCGGCCCAAGGGCACCTCAACCAACTCCTCCACCTCTCACGCATCATCCTCTCCTACAACATCCCGGTCCACTTCGTCGGAACTCCAATCCACAACCGCCAAGCCCTCACGCGCCTCCATGGATGGGAGTGGGACCCACGCTCCGTGCTCAACTTCCATGACTTCAAGGTCCCTCCTTTTCCCTCTCCTCCGCCTGATCCCAATGCACTCCGTCAAACCCATTCAAACTTCCCCTCCCACCTCCTCCCTTCATTCCAAACCGCCGCCATGCACCTCCGCGAACCAGTTCGATCTTTGTTGTCTTCCATCTCCTCCGTCGCCAGAAGAGTCGTCGTGATCCACGACTCCCTTATGGCCTCCGTCGTCCAAGACGCCGTACACTTATCGAACTGTGAAAGCTACACTTTCCACAGCGTCTCCGCCTTCACCATGTTCTTCTACTTCTGGAACGTTATGGGAACACCCATGCTTCAATCTTCCATAGCCTCTCACATACCTCAAGTTCCTTCTCTTGAAGGTTGCTTCACTACCCAGTTCGTTGATTTCATAAGTTCCCAATACGAGTTCCATAAGTTCAGCAGTGGAACCATTTACAACACTACCAGAGCCATTGAAGGTCCTTACATGGACCTCATAGAGCGTATGGTTAGTTACAAGACTCACTGGGCTCTGGGACCCTTCAACCCTTTGATACCTTCGTCTACAAGTAACAACAACAAGCACCCTTGCATGGATTGGCTTGATGAACAAGAAGATAATTCAGTGCTGTATGTTTCGTTTGGAACAACAACAGCATTCAAAGAGGAACAAATCATGGAGCTGGCAATTGGGTTGGAAGGAAGCAAGCAGAAGTTTCTTTGGGTTCTAAGAGATGCAGACAAAGGAGACGTGTTCAAAGAAGATGGAAAGAGAGAGGTGAAGGTTCCAAAGGGGTTCGAAGAACGAGTGAAAGGGATGGGAATGGTGGTTAGGGATTGGGCGCCACAGTTGGAAATATTAGGGCACCGTGCAACGGGTGGGTTTATGAGTCATTGTGGTTGGAATTCGTGCATGGAGAGCATAACAATGGGGGTGCCAATTGCCACGTGGCCTATGCATTCGGATCAACCGAGGAACAGGGTGCTGGTGACGGAGGTGCTTAGGATTGGGCTGGTGGTGAAGGATTGGAGCCACAGGGATGAGGTGGTGGCGGCTTCGGCGGTGGAAGATGCGGTGAGGAGGTTGATGGCGACGGAAGAGGGAGAAGCAATGAGAGAAAGAGCCATGAAGTTGATGAATGCGATCCACAAGTCCAAAGATGAAGGTGGTGTTTCTCGTGTCGAAATTGACTCTTTCATTGCTCATATAACTAGATGA 1479 0.5098 MASSSCQTSPTATNYNSTTKAHHQAQKAHHQHDVVVVVVPFPAQGHLNQLLHLSRIILSYNIPVHFVGTPIHNRQALTRLHGWEWDPRSVLNFHDFKVPPFPSPPPDPNALRQTHSNFPSHLLPSFQTAAMHLREPVRSLLSSISSVARRVVVIHDSLMASVVQDAVHLSNCESYTFHSVSAFTMFFYFWNVMGTPMLQSSIASHIPQVPSLEGCFTTQFVDFISSQYEFHKFSSGTIYNTTRAIEGPYMDLIERMVSYKTHWALGPFNPLIPSSTSNNNKHPCMDWLDEQEDNSVLYVSFGTTTAFKEEQIMELAIGLEGSKQKFLWVLRDADKGDVFKEDGKREVKVPKGFEERVKGMGMVVRDWAPQLEILGHRATGGFMSHCGWNSCMESITMGVPIATWPMHSDQPRNRVLVTEVLRIGLVVKDWSHRDEVVAASAVEDAVRRLMATEEGEAMRERAMKLMNAIHKSKDEGGVSRVEIDSFIAHITR* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0253 492 CDD GT1_Gtf-like 40 466 IPR002213 GO:0008194
Amo16g0253 492 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 280 471 IPR002213 GO:0008194
Amo16g0253 492 ProSitePatterns UDP-glycosyltransferases signature. 367 410 IPR035595 -
Amo16g0253 492 Gene3D Glycogen Phosphorylase B; 282 474 - -
Amo16g0253 492 PANTHER GLYCOSYLTRANSFERASE 25 492 - -
Amo16g0253 492 Gene3D Glycogen Phosphorylase B; 36 479 - -
Amo16g0253 492 PANTHER GLYCOSYLTRANSFERASE 25 492 - -
Amo16g0253 492 MobiDBLite consensus disorder prediction 1 27 - -
Amo16g0253 492 MobiDBLite consensus disorder prediction 1 22 - -
Amo16g0253 492 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 35 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0253 Amo-Chr16 3839214 3841126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0253 30 491 Glycosyltransferase AT2G15490 27.755 3.58e-61 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0253 K13495 K13492 gmx:100799527 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0253 16 3839214 3841126 Amo16g0253 16 3839214 3841126 ECH