Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0246 ATGGAGTTGCATGCAGAAGTGATGGAGAATGAAAATAAGAATAAGAATAATAATGTTGTTATTAGGAGGGAAGTGTGTTTGGTTTGGGAAGAATTGACAGTGGTTATTAACAGCGGCAAGAGCAGTAATAATAATAGTGAAAGAAGGAAGAAAGTGTTGAACGGAATAAGTGGATATGCTGAACCAAACAGAATCATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACCTTCCTTGATGCTCTTGCTGGAAGACTTGCAAGCAATGTCAGCATTACTGGAAATGTGCTACTGAATGGCACTAAGAGAACCACATCCTCTAGAGATCTTTCTTATGTAACACAAGAAGACCATTTCTTAGGAACACTAACTGTGAGGGAAACACTCACATATGCTGCTTATCTGAGACTTGCTGCAAACATGGCCAGTGATGAGATTGACAAGGTTGTAGCTAAGACGCTCGACGAAATGGGTCTTCAAGATTGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATAAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAAATCTTAACTCAGCCTCATATACTTTTGCTTGATGAACCTACCAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCAGAAGCATTGCACATGATGGCAGAATTGTTATTTGCTCCATTCACCAACTTAGCAGTGAAGTTTTCAACCTCTTTGATGACATGGTGATCCTCGCAGGAGGCGAAACTGTGTATTTTGGAGAAAGGACTAAAGCTGTTAAGTTCTTTGAAGATGCAGGGTTTCCTTGTCCAACAAGAAAGAACCCTCCTGAGCACTTCCTTCGTTGCATCAGCCCCGAATTCGATAGTGTTCTAACTTTGATACAGTCCAAGAATGCCAATAATGAAGCACCATCATCATGGAATTCTCTAATGAATATGACAACAGAGGAGATTAAATGGAAACTTATAAACTGTTTCAAGAATTCTAGGCAGTTAGCAAATGCAAGGGAAAAGATCAGAGAAATCAAACTAAGAAAAGAACCTCCAATAGAGAGGGCATATGATACTAGAACACTGAAGCAGCTATGCACATTGACTCATAGATCATTCCTTAACATGACCAGAGACATTGGTTACTATTGGTTAAGGATTCTGTTCTACATGTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACTAGTAATAGTGCAATCTTATCAAGAAGCAAGATTGATGGATTCATCTATGGCTTCATGATCTTTCTGTGCATTGGTGGCTTACCCTTCTTCCTTGAGGACTTAAAGGTCTTCGAGCGCGAAAGATTCGGAAGGCATTATGGAGAGGCAGTTTATGTTCTTTCGAGTTTCATCTCGTCACTTCCTTTTGTTGTTTTCATTTCCCTTACTTCAGGAACAACACTTTACCACATGGTGAATTTTCACCCTGGATTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGGTGCATGCTTTTAGTTGCTGCTCTTGTTTCCAACCAGCTCCTTGCTATTGGAACATCAGCTGCTATAACTATACTGATGATGATGCCATCAAATGCATTTCGAAGAATGATTGACATTCCGAAATTCTTCTGGCGCTATCCCATGTCCTACATCAGTTATATCGCTTGGTCAATACAGGGGCAATACAAGAATGACCTGATTGGACTTGAATTTGAAGGAATGATGCCAGGAGACAGAAAGATAAAGGGTGAAGTGATACTTGAAGAAATGTTTGGAATAAGAACAGATTATTCAAAATGGTGGGACATAGGAGCCTTAGTTTGCTTGTTAATATCATACAGATTGATGTTTTTCTTGGTTCTTAAGCATAGGGAGAGAGCTTCATCACTATTTCACACCATTTTACTCACAAGATCCTCCCTCAAACTCAAACTCAATCTCAATCTCAATTTCAATCACAAATATATTGCTACCAAGAGACACCATTCCCTATATCCTTTCTCATCTCAACATGGATTTACCTCTCCAATAATATCCTAG 2073 0.3975 MELHAEVMENENKNKNNNVVIRREVCLVWEELTVVINSGKSSNNNSERRKKVLNGISGYAEPNRIMALIGPSGAGKSTFLDALAGRLASNVSITGNVLLNGTKRTTSSRDLSYVTQEDHFLGTLTVRETLTYAAYLRLAANMASDEIDKVVAKTLDEMGLQDCAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLRSIAHDGRIVICSIHQLSSEVFNLFDDMVILAGGETVYFGERTKAVKFFEDAGFPCPTRKNPPEHFLRCISPEFDSVLTLIQSKNANNEAPSSWNSLMNMTTEEIKWKLINCFKNSRQLANAREKIREIKLRKEPPIERAYDTRTLKQLCTLTHRSFLNMTRDIGYYWLRILFYMLVSVCAGFLYLNVGTSNSAILSRSKIDGFIYGFMIFLCIGGLPFFLEDLKVFERERFGRHYGEAVYVLSSFISSLPFVVFISLTSGTTLYHMVNFHPGFSHYCYFCINLFCSISVTEGCMLLVAALVSNQLLAIGTSAAITILMMMPSNAFRRMIDIPKFFWRYPMSYISYIAWSIQGQYKNDLIGLEFEGMMPGDRKIKGEVILEEMFGIRTDYSKWWDIGALVCLLISYRLMFFLVLKHRERASSLFHTILLTRSSLKLKLNLNLNFNHKYIATKRHHSLYPFSSQHGFTSPIIS* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0246 690 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524
Amo16g0246 690 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 276 IPR003439 GO:0005524
Amo16g0246 690 SMART AAA_5 62 253 IPR003593 -
Amo16g0246 690 Gene3D - 34 270 IPR027417 -
Amo16g0246 690 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 26 649 - -
Amo16g0246 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 270 IPR027417 -
Amo16g0246 690 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 26 649 - -
Amo16g0246 690 Pfam ABC transporter 53 204 IPR003439 GO:0005524
Amo16g0246 690 Pfam ABC-2 type transporter 233 312 IPR043926 GO:0140359
Amo16g0246 690 Pfam ABC-2 type transporter 366 572 IPR013525 GO:0016020|GO:0140359
Amo16g0246 690 CDD ABCG_EPDR 27 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0246 Amo-Chr16 3730788 3735170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0246 51 245 Calmodulin-binding Proteins AT2G36910 27.962 2.62e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0246 - K05681 aip:107646291 1318.52