Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0245 ATGTTGCCTGTTATTATGGCTCCAACAACAATGGAGTTGCATGATGGTGGTGCAATCATGGAGAGTGATAATAATATTAGAGAAGTGTGCTTGGTTTGGGAGAATTTGGAAGTGGAAGTAGTAAGCAGTTATAGTAATGAAAGAAGGAAGAAAGTGTTGAATGGAATAAGTGGATATGCTGAACCAAACAGAATCATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACTTTCCTTGATGCTCTTGCTGGAAGGCTTGGCGGCAATGTTAGAATCACTGGAAATGTAACACTCAATGGGACTAAGACAACTACAAGCTGCAGAAACATTAATTATGTAACTCAAGAAGACTATTTCCTGGGAACTCTAACAGTGAGGGAAACACTAACATATGCTGCTCATCTGAGACTTGCTGCAAACAAGAGCAAAGATGAGATTGACAAGGTTGTAGCCAAGACGCTCGATGAAATGGGTCTTGAAGAATGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATAAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAAATCTTAACTCAGCCTCATATACTTTTGCTTGATGAACCTACCAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCACAAGCATAGCACATAATGGAAGAATAGTATTATGCTCCATTCACCAACTTAGCAGTGAAGTTTTCAATCTCTTTGATGATTTGGTGCTCCTTGCAGCAGGTGAAACTGTCTATTTTGGAGAAAGAACTAATGCTATTAAGTTCTTTGCTGATGCAGGGTTTCCTTGTCCAACAAGAAAGAATCCTCCGGAGCACTTCCTTCGATGCGTTAGTCCAGAGTTTGATAATGTTCTAAGTCTAATGCGGTCCAAAAATGTCAATGATACCCCATCATCATGGAATTCTTTAGTGAATATGACTACAGAGGAGACCAAATGGAATCTGATAAACAGTTTCAAGAATTCCATGCATTCAGCAAATGTGAGAGAAAAAATCAGAGAAATCAAACTAAGAAAAGAAGCTGTTATTGAGAGAGCATATGATACTAGCACACTGAAGCAGCTATGCACTTTGACTCACAGATCATTCCTTAACATGACTAGAGACATTGGTTACTACTGGTTAAGGATCTTGTTCTACATCTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACAAGTAATAATGCAATCTTGCCAAGAAGCAAGTGTGATGGATTCATCTATGGCTTTATGACCTTCCTTTGTATTGGTGGCATGCCCTTCTTCCTTGAGGAGTTAAAGGTGTTCGAAGGCGAAAGGTTTGGGAGGCGTTATGGCGAGGCCATTTACGTGCTGTCGAGTTTCATATCATCACTCCCTTTTGTTGTTGCCATTTCCCTGACTTCAGGAACAATACTTTACCACATGGTGAATTTTCACCCTGGATTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGCTCCATGCTTGTGGTTGCAGCACTAGGTCAATACAAGAATGACTTCGTTGGACTTGAATTTGAACCACTAATACCTGGGGATAGGAAGATAAAAGGTGAGGTGATACTTAAGGAAATACTTGGAATCCAAACAGATTATTCAAAATGGTGGGATGTTGGAGTCTTGGTTTTGTTGTTAATATCTTATAGAGTGCTTTTTTACTTGGCTCTTAAGCATAGGGACAGAGCTTCATCAATATTACGCACCACAATGAGTGAATGA 1791 0.4015 MLPVIMAPTTMELHDGGAIMESDNNIREVCLVWENLEVEVVSSYSNERRKKVLNGISGYAEPNRIMALIGPSGAGKSTFLDALAGRLGGNVRITGNVTLNGTKTTTSCRNINYVTQEDYFLGTLTVRETLTYAAHLRLAANKSKDEIDKVVAKTLDEMGLEECAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLTSIAHNGRIVLCSIHQLSSEVFNLFDDLVLLAAGETVYFGERTNAIKFFADAGFPCPTRKNPPEHFLRCVSPEFDNVLSLMRSKNVNDTPSSWNSLVNMTTEETKWNLINSFKNSMHSANVREKIREIKLRKEAVIERAYDTSTLKQLCTLTHRSFLNMTRDIGYYWLRILFYILVSVCAGFLYLNVGTSNNAILPRSKCDGFIYGFMTFLCIGGMPFFLEELKVFEGERFGRRYGEAIYVLSSFISSLPFVVAISLTSGTILYHMVNFHPGFSHYCYFCINLFCSISVTEGSMLVVAALGQYKNDFVGLEFEPLIPGDRKIKGEVILKEILGIQTDYSKWWDVGVLVLLLISYRVLFYLALKHRDRASSILRTTMSE* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0245 596 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524
Amo16g0245 596 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 276 IPR003439 GO:0005524
Amo16g0245 596 CDD ABCG_EPDR 31 258 - -
Amo16g0245 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 268 IPR027417 -
Amo16g0245 596 Pfam ABC-2 type transporter 233 353 IPR043926 GO:0140359
Amo16g0245 596 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 30 518 - -
Amo16g0245 596 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 518 590 - -
Amo16g0245 596 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 30 518 - -
Amo16g0245 596 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 518 590 - -
Amo16g0245 596 Pfam ABC-2 type transporter 365 524 IPR013525 GO:0016020|GO:0140359
Amo16g0245 596 SMART AAA_5 62 253 IPR003593 -
Amo16g0245 596 Gene3D - 26 270 IPR027417 -
Amo16g0245 596 Pfam ABC transporter 53 204 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0245 Amo-Chr16 3711199 3716900 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0245 43 245 Calmodulin-binding Proteins AT2G36910 28.440 2.76e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0245 - K05681 aip:107646291 955.666