LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo16g0232	ATGGCGTGTAACGGCTCTGGTTGCCAATCCGGTTGCTACAAAGACGAAGAAGAACCGAAGCGTGAGAATCTAGCAGTTCCAACAAAAACCGATTCAGCGAGCAATGGGAACATCTGCGTCAAGTGCAAGCTGAACGACTCTGTTTCGGGTTACGGCGGCATCGACGATGGTCGCTTCTGCGCTGATTGCTTCAGGAGCAACCTGTTTGGGAAGTTCAGATACGCGGTCACCTCGAACGCCATGATCTCTCCCACCGATAAGGTCCTTGTTGCATTCTCAGGTGGCCCTTCTTCAAGGATAGCTTTGCAGTATGTGCATGATTTGCAAGAGAGGGCACAGAAGAATTTTGATGCCTGTAGAGATAGGTCGTTGCCTGTGTTTGGTGTTGGAGTGGTGTTTATAGATGAGAGTGCTGTTGTGCCGATTCCTTCTGGTGAGATGGATGAGGCGGTTGGATTTGTTTCTTCGGTTGTTTCGTGTTTAGCCCCGCCAAAGAAGGAGTTGCATGTTGTTCCTATTGAGACAATTTACTCGTCCAATTCTAGTGACGGAAAGGACAGGCTGTTAAAGATTCTGAATGCTGTGAGTGATCCCACTGGAAGGGAGGATTTGTTGGTTAATATTCGCATGTTGGCACTTCAAAAGGTTGCTTCTGAATTTGGTTATAACAGACTTGTTCTAGGATCATGCATTTCAAGAATTGCTTCTCATGTCATTTCAGCCACTGTGAAGGGTCAGGGATATTCATTACCTGCAGATATACAGTATGTTGATGCTCGATGGGAAATTCCAGTTGTGCTTCCTCTACGTGATTGTTTCGCTCAAGAGATCAACATGCTTTGCCGCCTTGATGGTCTAAAGACTTTAAAGTTGTCTACAAGTCCAAGCTCTACCATCAATGGCTTGGTCTCATCATTTGTACAATTATTGCAGGAAGAAAACCCATCTAGAGAGAGCACAATTGTGAGAACAGCTGGGAAACTCATTCCTTTCCAATTTAACAAGATTCCCGAGATCACTGATGGTCATGTTCCCTTGGCAACTCGAAGACGCCAAAAGAGATATAATCTCAAATCGAATGAATCTGTTTCCTCGGAATCTTTCTGTCCTCTCTGCAATAGCCCACTTGATAAGTCTGAGATTGTTAATCGAAGCAACCATGATAATGGTAGCACTGGTGAATTTTTTTATGCTGCTTGCTGTTCTAGTTGTCAGTATCAGATACTTCCAAGAGATTCCACGACAATGGAGCAATTTTATACGGATTTACCCCAATCTATAGTTTCCAGATCAGAGGAAGCAAACAATTGTAACTTGAGTCTGCTAAGGGAACAAATACAAGATTGCTTGCTTTCAGATGATGAAGAAGAAACTTAG	1377	0.4386	MACNGSGCQSGCYKDEEEPKRENLAVPTKTDSASNGNICVKCKLNDSVSGYGGIDDGRFCADCFRSNLFGKFRYAVTSNAMISPTDKVLVAFSGGPSSRIALQYVHDLQERAQKNFDACRDRSLPVFGVGVVFIDESAVVPIPSGEMDEAVGFVSSVVSCLAPPKKELHVVPIETIYSSNSSDGKDRLLKILNAVSDPTGREDLLVNIRMLALQKVASEFGYNRLVLGSCISRIASHVISATVKGQGYSLPADIQYVDARWEIPVVLPLRDCFAQEINMLCRLDGLKTLKLSTSPSSTINGLVSSFVQLLQEENPSRESTIVRTAGKLIPFQFNKIPEITDGHVPLATRRRQKRYNLKSNESVSSESFCPLCNSPLDKSEIVNRSNHDNGSTGEFFYAACCSSCQYQILPRDSTTMEQFYTDLPQSIVSRSEEANNCNLSLLREQIQDCLLSDDEEET*	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo16g0232	458	Gene3D	HUPs	38	393	IPR014729	-
	Amo16g0232	458	Pfam	Cytoplasmic tRNA 2-thiolation protein 2	298	380	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Amo16g0232	458	PANTHER	CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2	31	452	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Amo16g0232	458	Hamap	Cytoplasmic tRNA 2-thiolation protein 2 [CTU2].	29	412	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Amo16g0232	458	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	62	289	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo16g0232	Amo-Chr16	3478534	3481814	Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo16g0232	K14169		-	gmx:100804325	726.087