Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0206 ATGACGGTGATAGCTGAGATTAGTGTTAACGATGGCAACTTAGTTGTTCATGGAAAGACTATACTGAGAGGAGTGCCAAACAACATTCAACTTGTCCCGAGTTCTGACAATAGCCTTGGCACCAGTGTATTTGTTGGTGCCACTGCTTCCAATAATAAAAGCCTGCATGTCTTTCCCATGGGTGTTCTAGACGAATTACGGTTCATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACCCAGAGGATGGGAAAATGTGGAAGGGATGTCCCTCTTGAGACGCAATTTATGCTCATTGAGAGCAATGGCAGTGAGATTGACGAAGACAATTCTGCAACAATCTACACTGTTATGCTTCCTCTCCTTGAAGGCCAATTCCGTGCCGTCCTGCAAGGCAACGACAATAACGAGCTGGAGATCTGTTTGGAGAGTGGAGACAATGATGTTGTTACCAGGCAAGGCATTAACCTTGTCTACATCCATGCTGGAACCAACCCGTTCGAAGTTATCAATCAGGCTGTGAAGGCCGTGGAAAACCGCATGCAAACTTTCTCTCATCGCGAGAAGAAAAGGTTGCCATCTTTTGTTGACTGGTTTGGCTGGTGTACATGGGATGCTTTCTATACTGATGTTAATGCCGAGGGTGTTGAAGAAGGCCTGAAAAGTCTATCAGAAGGAGGTACACCGCCACGGTTCCTCATCATAGATGACGGTTGGCAACAGATTGAAAGTAATAAACCAAACGAAGCTGATGATTGCGTCGTACAAGAAGGAGCACAGTTTGCTACTAGGTTGACTGGTATTAAAGAAAATGCCAAATTCCAAAAGAGGAATGAACAGAACAATGAACAAGTCTCAGGCCTGAAGCATGTTGTAGATGAAGCAAAGAAAAATCACAACGTGAAAAATGTTTATGTATGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCATCAGCAGCAGGGATGGAGCACTATGAAACTGCATTGGTCTATCCAGTACAGTCTCCCGGCATACTCGGGAACCAACCCGACATTGTCATGGACAGCTTAGCTGTCCATGGCCTTGGTCTAGTGCACCCAAAGAAGGTCTTCGATTTCTACAATGAGCTCCATGCTTACTTGGCGTCATGTGGAGTAGATGGAGTAAAGGTTGATGTTCAGAACATCATTGAGACCCTTGGTGCTGGACACGGCGGCAGAGTCTTGCTCACACGCAGCTATCTTCATGCACTCGAGGCTTCAATTGCTCAAAACTTTCCTGATAATGGATGCATTGCTTGTATGTGTCACAACACTGATAGCCTCTATAGTTCTAAGCAGACTGCTGTTGTGAGAGCGTCGGATGATTTTTACCCGCGTGATCCGGCCTCTCATACCATCCATGTTTCATCTGTAGCATACAACACACTTTTCCTTGGAGAATTCATGCAGCCAGACTGGGACATGTTTCATAGTTTACATCCAGCAGCCGAGTATCACGCCGCAGCTCGTGCAATTGGTGGATGTCCAATCTATGTTAGTGACAAGCCAGGCAACCACAACTTTGATCTTCTTAAGAAGCTGGTTCTCCCTGATGGTTCAGTTCTCCGTGCTCAGTTACCCGGAAGGCCCACCCTCGATTGCCTCTTCGCCGATCCGGCAAGAGATGGGACTAGCTTACTCAAAATATGGAACTTGAACAAATACTCTGGAGTAGTGGGTGCATTTAACTGCCAAGGTGCTGGATGGTGTAAGGTAGAGAAGAGAATCCGCATCCATGATGCATCTCCTGGAACTCTCTCCAGCTTTGTTAGTGCCTCTGATGTCGATCTCATAGCTCAAGTCGCCGGTGCTGGTTGGCGTGGCGATGTTATTGCCTATGCTTACAGATCAGGTGACATAACTCGGCTACCAAATGGTGCTTCAGTTCCGGTGACGTTGAATGTTCTGGAGTATGAGCTGTTCCATTTCTGTCCTGTGGAGGAAATTACCTCGAGTATCTCGTTTGCAGCAATAGGACTTCTGGACATGTTCAACACTGGAGGAGCTGTGGAGCAAGTTGAAATCCATAAAGTTTCTGAGAACAACAACATGGAACTATATGGTGGTGAGGCTTCATCTGAAGTGACCAATGATCCGATGAGGGGAAGTGGGAGATTTGGTGTATACTGCTCCCAACGGCCATTAAAGTGCACCGTCGGCGGAGCCAAAACCGAGTTCAAGTATGACTTGGATACTGGGCTGACAACATTCTCTATCCCAGTTCCTGATGAGGAGATGTATAAATGGTCAATACAGATCCAAGTTTGA 2295 0.4649 MTVIAEISVNDGNLVVHGKTILRGVPNNIQLVPSSDNSLGTSVFVGATASNNKSLHVFPMGVLDELRFMCCFRFKLWWMTQRMGKCGRDVPLETQFMLIESNGSEIDEDNSATIYTVMLPLLEGQFRAVLQGNDNNELEICLESGDNDVVTRQGINLVYIHAGTNPFEVINQAVKAVENRMQTFSHREKKRLPSFVDWFGWCTWDAFYTDVNAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESNKPNEADDCVVQEGAQFATRLTGIKENAKFQKRNEQNNEQVSGLKHVVDEAKKNHNVKNVYVWHALAGYWGGVKPSAAGMEHYETALVYPVQSPGILGNQPDIVMDSLAVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVLLTRSYLHALEASIAQNFPDNGCIACMCHNTDSLYSSKQTAVVRASDDFYPRDPASHTIHVSSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAIGGCPIYVSDKPGNHNFDLLKKLVLPDGSVLRAQLPGRPTLDCLFADPARDGTSLLKIWNLNKYSGVVGAFNCQGAGWCKVEKRIRIHDASPGTLSSFVSASDVDLIAQVAGAGWRGDVIAYAYRSGDITRLPNGASVPVTLNVLEYELFHFCPVEEITSSISFAAIGLLDMFNTGGAVEQVEIHKVSENNNMELYGGEASSEVTNDPMRGSGRFGVYCSQRPLKCTVGGAKTEFKYDLDTGLTTFSIPVPDEEMYKWSIQIQV* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0206 764 Coils Coil 278 298 - -
Amo16g0206 764 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 764 - -
Amo16g0206 764 Pfam Raffinose synthase or seed imbibition protein Sip1 7 747 IPR008811 -
Amo16g0206 764 PANTHER - 1 764 IPR008811 -
Amo16g0206 764 SUPERFAMILY (Trans)glycosidases 194 528 IPR017853 -
Amo16g0206 764 Gene3D Aldolase class I 198 523 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0206 Amo-Chr16 3045538 3049770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0206 1 559 Glycoside Hydrolase AT3G57520 77.857 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0206 K06617 - gmx:100807861 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0206 16 3045538 3049770 Amo16g0206 16 3045538 3049770 ECH