Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0202 ATGGGAGAAGCACCAGCATTCCTTGTTGATGACCTTCAGAATGAGCCTCTTAATGGATTTGAATTGAAAAATGGAACTTGCAAAACTGCAACTACAATTGGAAATAAAATGTATGTCATTGGTGGCGCTGATGATGGAACTTTGTCCATTGAAGTTCAAATTTTTCACCTTAGTCTTGGAGAATGGATTCATCCCACCGTGCATGGCACCAAACCTCTGTCGAGCAAAGGCCACTCCGCGGTGTTTTTGAACGACCGAATACTAATTCTTAAGAAGGGTGCCAAGTCAGATGATCAAATATGGTTTTTGGAGGTGGACACTCAATATGTTAGGCAGCAGCAAAAACAACTGGGGACTGAGGTTGTTGCGTGGAGTAAGGGAGTGATAGGTAATGCCGAGAAGCCGGTTGTTATCAGTGGACCTTCTGGGGTAGGCAAAGGAACACTGATATCAATGCTGATGAAGGAATTCCCATCCATGTTTGGTTTTTCGGTGAGCCACACCACTCGTGCACCAAGGGGCATGGAGAAAGATGGAGTCCATTACCATTTTACTGAGAAGAGTGTAATGGAGAAAGAGATTAAAGATGGAAAATTTCTTGAGTTTGCTTCTGTCCATGGTAATTTGTATGGGACCAGTGTTGAGGCTGTTGAAGTAGTAGCAGATGCTGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGCGCCAGATCCGTGAGGTCTAGTTCTCTTGAAGCTGTATTCATATTTGTTTGTCCCCCATCAATGGAAGAGCTGGAGAAGCGCCTTCGTGACAGAGGGACAGAGACAGAAGAACAAATCTTGAAGCGACTCCGAAATGCTGCAGCTGAGATCGAGCAAGGGAAATCATCAAACATATTTGATTTCATCTTATACAATGATAACCTTGAGGAGTGTTACGAAAAACTCAAGAAATTATTGGGACTTGGTGGTTGTGTTGCTGCTACACCTAAATCAGCACTTGGAGAGTTCAATCTACCATTGGATCATTCGGTGTCAAAAATCGATGACAAGATTATCATAAACTGCATCTCTTCTGGACTGGAGAAGGAATCAAAGAATTTAATCATGTTGGATGTCTCCGCGCTCAAAGGAGGTGCACCCGGACGGACAAGAGGATTGGATTTTCAGGCTATCGGCTCGTTTTCGGATGGTTTGATTGGGATGGAAAGGCTTAGCTAA 1203 0.4339 MGEAPAFLVDDLQNEPLNGFELKNGTCKTATTIGNKMYVIGGADDGTLSIEVQIFHLSLGEWIHPTVHGTKPLSSKGHSAVFLNDRILILKKGAKSDDQIWFLEVDTQYVRQQQKQLGTEVVAWSKGVIGNAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKSVMEKEIKDGKFLEFASVHGNLYGTSVEAVEVVADAGKRCILDIDVQGARSVRSSSLEAVFIFVCPPSMEELEKRLRDRGTETEEQILKRLRNAAAEIEQGKSSNIFDFILYNDNLEECYEKLKKLLGLGGCVAATPKSALGEFNLPLDHSVSKIDDKIIINCISSGLEKESKNLIMLDVSALKGGAPGRTRGLDFQAIGSFSDGLIGMERLS* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0202 400 SMART gk_7 132 318 IPR008145 -
Amo16g0202 400 Pfam Guanylate kinase 133 314 IPR008145 -
Amo16g0202 400 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Amo16g0202 400 CDD GMPK 135 308 - -
Amo16g0202 400 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Amo16g0202 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Amo16g0202 400 SUPERFAMILY Galactose oxidase, central domain 29 112 IPR011043 -
Amo16g0202 400 Gene3D - 23 127 IPR015915 GO:0005515
Amo16g0202 400 PANTHER GUANYLATE KINASE-RELATED 1 346 - -
Amo16g0202 400 Gene3D - 129 316 IPR027417 -
Amo16g0202 400 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
Amo16g0202 400 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 346 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0202 K00942 - gmx:100527163 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0202 16 2946776 2950443 Amo16g0202 16 2946776 2950443 ECH