Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0149 ATGGCATCAGAGAAGAGTTTTCTTCTTGTTGTGGCTGTGCTGCTTCTGCTCTCGCCTGCACTGGGAGCAAAGGAGCGGTGCAACCCACAGGACAAGAAAGCTCTCCTTCAGATAAAAAAGGACTTCAACAACCCTTACGTGCTGACTTCATGGAAGCCCGAAGAGGATTGCTGCACCTGGTACTGCGTAGAGTGCGACCGGAAAACCAACCGCATTGTCACCATCAACATTTACCTTTCTGTCCCTGAGACTAATTTCTCCGCCAAAATCCCAGACTCCATCGGCCTCCTCCCTTACCTCCAGACCCTCACACTCCACCACCTCCCCTACCTCACCGGCCCAATCAACCCCGCCATCGCCAAGCTCACCAACCTCAACTTCCTCCAAATTAGCCGCACCAACATCTCCGGCCCGGTACCTGCCTTCCTGGCCCAGCTCAAAAAACTCACGTATATTGACCTCTCCTTCAACAACTTATCAGGCTCTATACCCCCCGAGTTAGGCCAGCTGCCCAAGCTTGAGGCCCTGCATCTCGACCGGAACCACTTGACCGGGCCCATCCCTGCCTCCTTCGGCTCTTTGAAGTCCAACCCGGACATATACCTCTCCCACAACAACCTCTCCGGGCCCATCCCTCCCTCGTTCTTCAGACTCAACTTGACGCGGTTGGATCTGTCGAGGAACAAGCTCGTGGGCGATGCGTCTGGGCTTTTCGGGGCCACCAAGGCGACGCAGACGATAGACCTTTCGAGAAACCAGTTTGCATTCGACCTGAGCAAGGTCAAGTTCTCAAAGACTATAATTTCATTGGATTTGAACCACAACAAGTTGTACGGTGCGCTACCCGCGAGCCTGACCGCACTAGACAATCTACAGCTCTTCAATGTGAGCTACAACAGGCTTTGCGGGAAGATCCCTGTGGGTGGGAATCTTCAGAAGAACGATGTTTACTCATATTTTCATAACAAGTGTTTGTGTGGTTCTCCACTCCCCAAATGCAGCAACTGA 1008 0.5288 MASEKSFLLVVAVLLLLSPALGAKERCNPQDKKALLQIKKDFNNPYVLTSWKPEEDCCTWYCVECDRKTNRIVTINIYLSVPETNFSAKIPDSIGLLPYLQTLTLHHLPYLTGPINPAIAKLTNLNFLQISRTNISGPVPAFLAQLKKLTYIDLSFNNLSGSIPPELGQLPKLEALHLDRNHLTGPIPASFGSLKSNPDIYLSHNNLSGPIPPSFFRLNLTRLDLSRNKLVGDASGLFGATKATQTIDLSRNQFAFDLSKVKFSKTIISLDLNHNKLYGALPASLTALDNLQLFNVSYNRLCGKIPVGGNLQKNDVYSYFHNKCLCGSPLPKCSN* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0149 335 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Amo16g0149 335 Pfam Leucine Rich Repeat 148 168 IPR001611 GO:0005515
Amo16g0149 335 PANTHER POLYGALACTURONASE INHIBITOR 1 6 334 - -
Amo16g0149 335 Gene3D Ribonuclease Inhibitor 26 334 IPR032675 -
Amo16g0149 335 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Amo16g0149 335 SUPERFAMILY L domain-like 26 332 - -
Amo16g0149 335 PANTHER POLYGALACTURONASE INHIBITOR 2 6 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0149 Amo-Chr16 2014064 2015385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0149 79 332 Receptor kinase-like Gene Family AT2G15080 26.974 3.66e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0149 - - aprc:113862147 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0149 16 2014064 2015385 Amo16g0149 16 2014064 2015385 ECH