Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0136 ATGTTTAGCCACTCATCAAATGTGAGAAGCAATAATAATAATAATAACAATAATCTTCAAGTATTCTCAGTGAAAGCATCAACACTACCATCATCATCATCTTCAACTTCAACCTTAAGCTCCATGAAACTAAAGAGAATCATCCACACCCTAATAGTCTCCCACATGTGTAGAATCATTCGTGCACTATCTAAGGTCAAGGAATTTATGCTTGACATTCTCAATAACCCTACCAATAATATTATTCACTTTCCCTACACTTCTTCTTCGTCGCAAAAAAAGCGCCGCAATAAGATTATAATGGGATCTTTTAGGCTTCATTATAATTGGTGCTCTTCGAAATCGTCACATGTTTTGCCGGTTCCTCAACGGGTCTATGAAGGGTTATGCTGTGAAGAATCATCAACAACTCAGAGTAACAATGGTGGTGAGGATTGTCCCGATTTGCAACTTGCAGGGTATCTAAGGTGGCTTGAGGAGAAGAAGGTTCAAGAAGGTGAAGAGAAAGAGAAAGAGAAAGAGAAAGAGATGAATGAGATTGATGTGTTGGCTGAAATGTTCATTGCGAATTGCCATGAGAAGTTCAGGTTGGAGAAGCAAGAATCTGATAGAAGGTTTCAAGAGATGTTAGCTCGAAGCATGTGA 645 0.3876 MFSHSSNVRSNNNNNNNNLQVFSVKASTLPSSSSSTSTLSSMKLKRIIHTLIVSHMCRIIRALSKVKEFMLDILNNPTNNIIHFPYTSSSSQKKRRNKIIMGSFRLHYNWCSSKSSHVLPVPQRVYEGLCCEESSTTQSNNGGEDCPDLQLAGYLRWLEEKKVQEGEEKEKEKEKEMNEIDVLAEMFIANCHEKFRLEKQESDRRFQEMLARSM* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0136 214 Pfam Cotton fibre expressed protein 178 212 IPR008480 -
Amo16g0136 214 Coils Coil 155 186 - -
Amo16g0136 214 PANTHER EMB|CAB67623.1-RELATED 19 214 - -
Amo16g0136 214 PANTHER DUF761 DOMAIN PROTEIN 19 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0136 Amo-Chr16 1745640 1746284 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0136 - - adu:107492811 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0136 16 1745640 1746284 Amo16g0136 16 1745640 1746284 ECH