Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0101 ATGAACATCGGTGCCATGAAAGCCTCACTCTTGAGCTCTAACACCAACAATCTCCATTTCTCTCTTCGGGCTGCACTCTTTCATTCCACTCCCTTCTTGGAACGCAAACGGCGTAATTCCTGGGATTCTAAATGCAACCATTACTCGAGAAGGTTTAGGAAGATGCATGGAAAGCAAAGAATAATTCGCAGTATGAATGATTATGCAGAGTTCCTATTTCAGAGATGGAAGCAAGATATTGATGATGAGGATGATCCATCTTCAAGTGGGGGGCCGTCATGGTTTAGAAAGCAATATACCGCTGGAGCCTCTGGAAAGCACAGGAATAACGGTCAAGGAAGTCATCGATACAGAAGAGATCCATTCTTTTGTGAAGATGATTTCGATATTGAAACCATTTTCCGCTCTACCTTTGGTGGGAATAGATACCACTACTGGTCCTTCATCAATGAGGAAAATCCTCAGTGGAGGAGGTCTGCACGCTTTTCTAATTATGAGAAATCTTGGAGCTGGAGACATCGGAGTGAAAGCGATTATGACTCTGCATCCGAGTCTGATAGTTTACATTCAGATTTAACTACAGATAGATTAGCCCTTGGATTGAGTCCTTCTGGTCCTCTGAAACTTGAAGAAGTGAAAAATGCGTATCGCGTCTGTGCTCTAAAGTGGCATCCAGATCGTCATCAAGGCTCTTCCAAGAGGAGAAATTCAAGCTCTGCAGTGCAGCTTATCAGTCTTTATGTGATAAGCTGGCCTTGGATTAAGGATGCTCCTCATGCAGAGAAGCTTAAATCCCTAGGACTTGAGTGGTCAACAGTGAGGCCTTTCTCCAAGAGAGCTGGTGTATGTTTGACCATGCTAATTTAA 867 0.436 MNIGAMKASLLSSNTNNLHFSLRAALFHSTPFLERKRRNSWDSKCNHYSRRFRKMHGKQRIIRSMNDYAEFLFQRWKQDIDDEDDPSSSGGPSWFRKQYTAGASGKHRNNGQGSHRYRRDPFFCEDDFDIETIFRSTFGGNRYHYWSFINEENPQWRRSARFSNYEKSWSWRHRSESDYDSASESDSLHSDLTTDRLALGLSPSGPLKLEEVKNAYRVCALKWHPDRHQGSSKRRNSSSAVQLISLYVISWPWIKDAPHAEKLKSLGLEWSTVRPFSKRAGVCLTMLI* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0101 288 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 6 234 - -
Amo16g0101 288 Coils Coil 288 288 - -
Amo16g0101 288 CDD DnaJ 199 242 IPR001623 -
Amo16g0101 288 SUPERFAMILY Chaperone J-domain 151 244 IPR036869 -
Amo16g0101 288 Gene3D DnaJ domain 200 245 IPR036869 -
Amo16g0101 288 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 6 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0101 Amo-Chr16 1334645 1337411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0101 - - gmx:100807880 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0101 16 1334645 1337411 Amo16g0101 16 1334645 1337411 ECH