Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0100 ATGCTGAAAGCTATTCAGATACGTGGGTGTGTTACCCTCCGTTGTTGGAGCCTCAAACAARCCCTTTCCTTCATTTCTATTTCATCTTCTTTCAATTCCAAACCCTTTTCCTCATTCTCCCCAATCCCATACCCTTCCATCGATTCTTCCACGCCCCGACCTCGCAGGCTTCGATTCACTCCCTTTCACGCTTCATCATCACCACCACCCCCACCACTACTTCATTCTGCTGGTGTTCGAAACATCAAGTTCTGRCAGTGGTGTGGTGGTCCAACAAAGCATGATATACCTGATGGAGAAGAAAAATTGAGAGCCATTTGTACACTTTGTGGGAAGATTGCTTATCAGAATCCAAAAATGGTAGTCGGTTGCCTCATCGATCATGATAACAAGGTCCTTCTTTGCAAGAGGAATATTCAACCATCTCATGGCCTTTGGACGCTTCCTGCTGGTTATTTGGAAATTGGAGAATCAGCTGTGGAAGGTGCTATAAGGGAAACGAGGGAAGAAGCAAARGCTGATGTGGAAGTTATTTCTCCGTTTGCTCAATTGGATATTCCTTTAATCGGTCAAACTTATATGATATTCTTAGCAAAACTGAAGACACCCCACTTTTCACCGGGTCCAGAATCATCAGAATGCCAACTATTTCCGGTTGATGAAATACCTATCYATTCTCTATCCTTTTCATCAATGGTGGTTACCTTAAGTTTGTATGTTGAGGATGTTAAGGCTGGAAAACCTAAATTCCATTATGGCATCATCAACAAAAGGCCCGGTACGAGTCCTTCAGATATTCATGCCTATACATTGGACTATCATATGCACTTGTGA 834 0.4269 MLKAIQIRGCVTLRCWSLKQXLSFISISSSFNSKPFSSFSPIPYPSIDSSTPRPRRLRFTPFHASSSPPPPPLLHSAGVRNIKFXQWCGGPTKHDIPDGEEKLRAICTLCGKIAYQNPKMVVGCLIDHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESAVEGAIRETREEAKADVEVISPFAQLDIPLIGQTYMIFLAKLKTPHFSPGPESSECQLFPVDEIPIXSLSFSSMVVTLSLYVEDVKAGKPKFHYGIINKRPGTSPSDIHAYTLDYHMHL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0100 277 MobiDBLite consensus disorder prediction 48 70 - -
Amo16g0100 277 Pfam NUDIX domain 122 222 IPR000086 -
Amo16g0100 277 PANTHER BNAA03G19740D PROTEIN 1 275 - -
Amo16g0100 277 PANTHER NUDIX HYDROLASE 23 1 275 - -
Amo16g0100 277 ProSiteProfiles Nudix hydrolase domain profile. 117 240 IPR000086 -
Amo16g0100 277 SUPERFAMILY Nudix 83 241 IPR015797 -
Amo16g0100 277 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 117 268 - -
Amo16g0100 277 Pfam Nudix N-terminal 83 116 IPR029401 -
Amo16g0100 277 Gene3D - 81 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0100 Amo-Chr16 1330846 1333880 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0100 K18453 - gmx:100808417 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0100 16 1330846 1333880 Amo16g0100 16 1330846 1333880 ECH