Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0092 ATGTCTGCTACAGGGTTATTATATCCACATATTCTCTATGGTGAAGTCGTAGTTTACCAGAGAGATCAACAGCACCAGCACCAGCACCAGTGCTTGGTAAGTAGTAGTAGTGGCAGATACGTGTTTTTATCTTCATTGAAGAGTAGTAGTGGTTGCGGGAACGCTTCTTTTGGGCAGAGGATTAGGCGGAGGAATTTCAGAGTTGAAGCGACGTGGCCAGATTTGTCAAGACCAAGTGTCATAGAGATGGAATCCATTGATGATAGTGAGCAGCTTGATCAAATTCTGCTTCATGCTCAGCAAAATTCACAACCCATCATCATTGATTGGATGGCTGCTTGGTGCCGTAAATGCATATATTTGAAGCCCAAGTTGGAGAAATTGGCTGCGGAGTATGACACAAAGATCAAATTTTATTACGTGGATGTGAATAAAGTGCCTCAGACTCTAGTGAAGCGTGGCAATATCTCTAAAATGCCAACAATTCAGTTGTGGAAAGATGGGGAGATGAAAGCAGAGGTGATTGGAGGCCACAAGGCCTGGCTAGTCATTGAAGAAGTCAGAGAAATGATCCTAAAGTTTCTATAG 588 0.4303 MSATGLLYPHILYGEVVVYQRDQQHQHQHQCLVSSSSGRYVFLSSLKSSSGCGNASFGQRIRRRNFRVEATWPDLSRPSVIEMESIDDSEQLDQILLHAQQNSQPIIIDWMAAWCRKCIYLKPKLEKLAAEYDTKIKFYYVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMILKFL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0092 195 PANTHER THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC 6 194 - -
Amo16g0092 195 CDD TRX_family 90 191 - -
Amo16g0092 195 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 6 194 IPR044253 GO:0009570
Amo16g0092 195 SUPERFAMILY Thioredoxin-like 83 191 IPR036249 -
Amo16g0092 195 Pfam Thioredoxin 100 180 IPR013766 -
Amo16g0092 195 Gene3D Glutaredoxin 80 191 - -
Amo16g0092 195 ProSiteProfiles Thioredoxin domain profile. 66 195 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0092 Amo-Chr16 1215812 1217601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0092 - - adu:107492880 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0092 16 1215812 1217601 Amo16g0092 16 1215812 1217601 ECH