Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0090 ATGTCTCTCCCAACAGAAACAGAAACAGAAACAGCATCGTCTTTCTTTGATTCCTTCTGTTTCCGCGGAACCCTAATGAACCCACGACGAACCCAGCGGTTCAAACGAGTAGCCGAACCGGAGAAGAAGAAGAAACCCAGCCCTACTAAATCATCCAAGTTCAGCGCTGCAAAACCCAAACGCATATCAGAATCCAAATCAGCCACAAAAATGGAAATTTTACCCTCCTCTTTCTTCCAGATTGATGCTTTAGACCTTGCCCCTCGTTTGCTCGGAAAGTTCCTTCGCCGTGACGACGTCGTTCTTCAGATTACTGAGGTTGAAGCTTACAGACCAAATGATTCAGCTTGTCATGGGCGGTTTGGCATTACATCAAGGACTGCCCCTGTTTTTGGACCAGGTGGGCATGCTTATGTTTATCTTTGCTATGGTCTCCACATGATGCTCAATGTTGTTGCTGACAAGGAAGGAGCTGGAGCSGCTGTCTTGATACGTTCTTGTGCTCCCATTAGCGGATTGAATGTCATTCAGCAGCGTCGAGGTCTGGAAACTGATAAACCTATACTTCTTACTGGCCCTGGCAAGGTAGGTCAGGCACTGGGTCTTTCAACGGAGTGGTCCAACCATCCTCTTTATACCCCTGGTGGTTTGGAACTCTTAGATGGTCCAAAGCCAGAAAACATATTAGTGGGTCCACGTGTGGGTATACAATATGCTTCGCCAGAGCATATCAATGCATTATGGAGATTCGCCATTGCCGGATCACCTTGGATTAGTGCTCCAAAAAATACTCTCAGGGCCCCATTGTAG 810 0.4716 MSLPTETETETASSFFDSFCFRGTLMNPRRTQRFKRVAEPEKKKKPSPTKSSKFSAAKPKRISESKSATKMEILPSSFFQIDALDLAPRLLGKFLRRDDVVLQITEVEAYRPNDSACHGRFGITSRTAPVFGPGGHAYVYLCYGLHMMLNVVADKEGAGAAVLIRSCAPISGLNVIQQRRGLETDKPILLTGPGKVGQALGLSTEWSNHPLYTPGGLELLDGPKPENILVGPRVGIQYASPEHINALWRFAIAGSPWISAPKNTLRAPL* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0090 269 TIGRFAM 3mg: DNA-3-methyladenine glycosylase 74 259 IPR003180 GO:0003677|GO:0003905|GO:0006284
Amo16g0090 269 MobiDBLite consensus disorder prediction 32 48 - -
Amo16g0090 269 CDD AAG 78 259 IPR003180 GO:0003677|GO:0003905|GO:0006284
Amo16g0090 269 MobiDBLite consensus disorder prediction 31 67 - -
Amo16g0090 269 Hamap Putative 3-methyladenine DNA glycosylase. 76 259 IPR003180 GO:0003677|GO:0003905|GO:0006284
Amo16g0090 269 Pfam Methylpurine-DNA glycosylase (MPG) 77 256 IPR003180 GO:0003677|GO:0003905|GO:0006284
Amo16g0090 269 SUPERFAMILY FMT C-terminal domain-like 71 264 IPR011034 GO:0003824
Amo16g0090 269 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 35 266 IPR003180 GO:0003677|GO:0003905|GO:0006284
Amo16g0090 269 Gene3D - 68 267 IPR036995 GO:0003677|GO:0003905|GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0090 Amo-Chr16 1195884 1198488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0090 K03652 - gmx:100813424 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0090 16 1195884 1198488 Amo16g0090 16 1195884 1198488 ECH