Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0080 ATGGCTGGAAAAGCATCAACATCAAAACCTAATATAGGTCTCAGCGGCACTGGTGGCCTTTCACATGCTTACATTCAGTATCCACCATTTCGGTGCAATGTTCCTGGATCAAAGGGATTGTTTTATGATGATGGAAACAAATTGCTACTCTCTCCAACAGCTGATCAAGTGTTTTCATGGAAAGTTGTTCCCTTTGATCCTCTTATTGATCCCACCACTGATTCAATAAGTGAGGGGCCTATTTTAGCTATTCGATACTCTTTARACACAAAGGTTATCGCGATCCAACGATCGAAYCATGAGATACAATTTCAGATCAGAGAGACAAGGGAAACTTTTAGCCATAAGTGCAGGCCAGAATCAGAAAGCATACTTGGTTTTTTTTGGACTGATAGCCAACAATGTGATATTGTAATTGTTAAGACCAGTGGTCTAGACTTGTATGCATATAATTCAGCCTCTAAATCAWTTCAATTGGTCGAAACAAAGAAAATCAATGTGAGTTGGTACGTTTACACACATGAAAGTCGGTTGGTTCTTCTTGCTTCTGGAATGCAGTGCAAGACATTCCATGGATTTCAGATTTCATCTGCAGATATTGTTCGCTTGCCAAGGTTTGACATGGTTATGGCCAAATCTGAGGCCAATAGTAAGCCTGTTTTAGCTGCTGAAGACATCTTTATTATCACTGTTTATGGTAGGATATATTGCTTGCAAGTTGATAGAGTTGCTATGCTACTCCATTCATATAGGCTATATCGTGATGCTGTGATTCAGCAGGGTTCTCTACCAATATATTCCAGCAGGGTTGCTGTGAGTGTGGTTGACAATGTACTTCTTATCCATCAAATTGAAGCAAAGGTTGTCATACTTTATGATCTCTTTGCAGATTCTCGAGCTCCRATATCTGCACCCCTTCCTTTATTGCTAAGAGGTTTTCCTAGGTCCAGTACTACTACRTCTCAATCTAGTGGTAGAGAAAGTCAWAGTTCATACAGTAACGTGAGTAATCATGAAGCAGTTACCTATGCCGATTCATGGACTTTTCTAGTGCCTGACCTTGTATGTGATGTGACCAACAAGTTATTATGGAAGTTTCATTTAGACTTAGAGGCAATTTCTGCCAGTATCTCAGAGGCCCCATCAATATTAGAGTTCCTGCAGCGGAGGAAGTTGGAAGCTAACAAGGCAAAACAATTGTGCTTAGGTATAATTCAAACACTTATTCTGGAGCATAGGCCTGTACCTGTAGTTGCCAAAGCTATACACGTAGTGGTTACCTCATACTCTCATTCAATTAAGACTGGTAGCTATCTTAAGGGCCTGAAGCCAGAGAAGCCATCGGCATCTAGTGTACAAAATGCTGGTGCTGATGTATCTGCTGTAGGAACAAATGCAATTGGAAAATCAATTGCACGTGAATCCGATGCAAGGGTGGACAGAGGATCTTCTAGTAAAGCTTTAAGTCTGGATTCTGAGGATGAGTCCCGTACTGCAAATCCAAAACACAATTCAAAGGAGACCCAAGTTGGGGATGAAGTGAAYGATGAGAACTCCTCTGGMACTGAAGTTCATAATGCTYATGTTACGCAATCATCTCTGCAGCTTGGGCAAGAGGAATCCCAACTCGCCTCCGCAGCAATTTCACCAGATGAGATGTACAGCTTTGTCTTTTCTCCCATTGATGAAGAGATGGTTGGAGACCCTTCTTACTTGGTTGCCATCATTATTGAATTCCTTCACAGTGCAAATGTGGAAAAGATTCGAGCACTCCCAAATCTGTATGTATTGATAATTCAATTGCTGGTCCGCAATGAACGATATGCAGAACTTGGGTTGTTTGTCATAAACAAGATTTTGGAGCCCTCTAAGGAAGTTGCACTACAGCTCCTAGAGTCTGGTCGTCAGAATACGCAAACTAGGAAGCTTGGACTGGACATGCTGAGACAGCTTGGTYTACATCATGATTATGTGATGCTGCTACTGCAAGATGGATACCACATGGAAGCATTACGATATGCACGGAAATTCAAGGTGGATAGCATCCGGCCGGCATTGTTCTTGGAAGCAGCATTTGTTTCCAATGACAGTCAACGTCTTGCTGCAGTTCTAAGGTTCTTTRTAGATTTCCTTCCTGGCTTCAAGAACACCTTAGACCATAATAGATACCTCCGCATACTGAATGAGATGAACACATCCATGACTGCTTGA 2211 0.4152 MAGKASTSKPNIGLSGTGGLSHAYIQYPPFRCNVPGSKGLFYDDGNKLLLSPTADQVFSWKVVPFDPLIDPTTDSISEGPILAIRYSLXTKVIAIQRSNHEIQFQIRETRETFSHKCRPESESILGFFWTDSQQCDIVIVKTSGLDLYAYNSASKSXQLVETKKINVSWYVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFDMVMAKSEANSKPVLAAEDIFIITVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSSRVAVSVVDNVLLIHQIEAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTTTSQSSGRESXSSYSNVSNHEAVTYADSWTFLVPDLVCDVTNKLLWKFHLDLEAISASISEAPSILEFLQRRKLEANKAKQLCLGIIQTLILEHRPVPVVAKAIHVVVTSYSHSIKTGSYLKGLKPEKPSASSVQNAGADVSAVGTNAIGKSIARESDARVDRGSSSKALSLDSEDESRTANPKHNSKETQVGDEVNDENSSGTEVHNAXVTQSSLQLGQEESQLASAAISPDEMYSFVFSPIDEEMVGDPSYLVAIIIEFLHSANVEKIRALPNLYVLIIQLLVRNERYAELGLFVINKILEPSKEVALQLLESGRQNTQTRKLGLDMLRQLGLHHDYVMLLLQDGYHMEALRYARKFKVDSIRPALFLEAAFVSNDSQRLAAVLRFFXDFLPGFKNTLDHNRYLRILNEMNTSMTA* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0080 736 MobiDBLite consensus disorder prediction 473 532 - -
Amo16g0080 736 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 15 733 IPR040371 GO:0010506|GO:0035658
Amo16g0080 736 Pfam Colon cancer-associated protein Mic1-like 569 708 IPR009755 -
Amo16g0080 736 MobiDBLite consensus disorder prediction 473 513 - -
Amo16g0080 736 MobiDBLite consensus disorder prediction 514 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0080 Amo-Chr16 1062499 1068369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0080 K24763 - gmx:100500389 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0080 16 1062499 1068369 Amo16g0080 16 1062499 1068369 ECH
Amo16g0080 16 1062499 1068369 Amo06g0426 06 6046564 6052426 hybridization