Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0073 ATGCTCAAACCCTTAACTCTCATCTCCACATTCACCCTCCTCTTCTTCCTCTTCTCTTCCCATGTAACCGCCAAACAACCTCGCTTTTATCGAACCATCTCTCCCACATTTCTAGGCCTACGCAAGGAGAAGCTTACTCACCTCCATTTCTACTTCCACGACACTGCCAGCGGCCCAAACCCCACCGCCATCGTAGTCGCCCAGGCCCAAATAACCAAAAACTCCTCCACTCTCTTCGGAGCCGTGGCCGTCATGGACGATCCCTTGACCGTGGGGCCTGAGCCCGGCTCCAAGATTGTGGGAAAAGCCCAGGGAATCTGGGCGGCTGCTTCGCATGACGAGATTGGGTTGGTAATGGTGGTGAACTTGGAGTTCTGTGAAGGGAAATACAATGGCAGCACGTTAAGCTTGTTTGGACGGAACGCGGTGCTTAACAGCGTGAGGGAGATGCCCATTGTTGGTGGCAGTGGGGTTTTCCGATTTGCGCATGGTTATGGTGAGGCCAAGACACACTGGTTCAATATAACGTCAGGGGATGCTGTTGTTGAATACAATGTCTACGTCTTCCACTATTGA 576 0.5226 MLKPLTLISTFTLLFFLFSSHVTAKQPRFYRTISPTFLGLRKEKLTHLHFYFHDTASGPNPTAIVVAQAQITKNSSTLFGAVAVMDDPLTVGPEPGSKIVGKAQGIWAAASHDEIGLVMVVNLEFCEGKYNGSTLSLFGRNAVLNSVREMPIVGGSGVFRFAHGYGEAKTHWFNITSGDAVVEYNVYVFHY* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0073 191 Gene3D - 38 186 IPR044859 -
Amo16g0073 191 PANTHER NUCLEOPORIN-RELATED 9 190 IPR004265 -
Amo16g0073 191 Coils Coil 191 191 - -
Amo16g0073 191 Pfam Dirigent-like protein 46 189 IPR004265 -
Amo16g0073 191 PANTHER DIRIGENT PROTEIN 9 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0073 Amo-Chr16 946164 946739 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0073 - - gmx:100816095 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0073 16 946164 946739 Amo16g0073 16 946164 946739 ECH
Amo16g0073 16 946164 946739 Amo06g0432 06 6180874 6184207 hybridization