Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0038 TTTTCAATCTTGTTCCTCCTTCCATTGAGAAAGAGAAAGAGAGAGATGAGAGGATTACAGTTACCGTTGACCCAAACTCAGAAGGTTCGTCTCCAGAACGCTCTGCAGCAGCTGGAGTCACTCTCCTCCAAGGTCAACTCCGATGCCTCCGTCACCGTCGCCGATTCCATTTCCGTTAACCACGAGGAAGGCGTCCTCAAGGGCCACGGAACCGCAGACATCAACGGCGACCTCGTTGCCACCCTCTGCGGCGTAGTTGAGCGCGTCAATAAGCTCGTCTATGTCCGCGCCCTGCGATCCAGCTACAAACCCGAAGTTGGAGACATCGTCATTGGACGTGTTGTCGAGGTTTCTCAAAAGCGTTGGAGGTTGGAGATAAATTACAGTCAAGATGCAGTTTTGATGCTTTCTTCTATGAATATGCCTGATGGTGTCCAGAGACGGCGGACAGCTGTGGATGAACTAAATATGCGTTCAATTTTTGAAGAGAAGGATGTTGTTTGTGCTGAAGTTCGTGGTTTCCAGCGTGATGGCTTACATCTTCAGGCAAGAAGTCAGAAATATGGGAAGCTTAACAGAGGTCAACTGCTAACAGTCCCACCTTACTTAGTTAAGAGGCAAAAGCAACATTATCATCATCTTGAGCAATATGGTGTTGATTTGATACTTGGATGTAATGGATTCATATGGATTGGAGAACATATTGAAGCCAAAGATGACATGGTAGAAGATCAAGTGAGCCATTCCAATAGAAATTCAGCAAGTCTTGAAGAACAAGAGAAAAATTATACGGCATTGGAAACAAGAAAATACATATGCAGGGCTGCTAATGCTATTAGAGTATTATCTACTTTGGGTTTCAATATGACATTAGAAATCATCAAGGGAGTTATTGATTTAAGCCTTTCGCTAAATCTTGATATACATGATATGCTTGGTTCGGAGTTCTATGTTCAGGTTGCTGAAAAAGAGGCTGAAAGGAGAAGCTCAAGTAAAAAGAAGAGGTAG 1008 0.4385 FSILFLLPLRKRKREMRGLQLPLTQTQKVRLQNALQQLESLSSKVNSDASVTVADSISVNHEEGVLKGHGTADINGDLVATLCGVVERVNKLVYVRALRSSYKPEVGDIVIGRVVEVSQKRWRLEINYSQDAVLMLSSMNMPDGVQRRRTAVDELNMRSIFEEKDVVCAEVRGFQRDGLHLQARSQKYGKLNRGQLLTVPPYLVKRQKQHYHHLEQYGVDLILGCNGFIWIGEHIEAKDDMVEDQVSHSNRNSASLEEQEKNYTALETRKYICRAANAIRVLSTLGFNMTLEIIKGVIDLSLSLNLDIHDMLGSEFYVQVAEKEAERRSSSKKKR* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0038 335 Gene3D - 51 102 - -
Amo16g0038 335 CDD S1_Rrp4 102 191 - -
Amo16g0038 335 SUPERFAMILY Ribosomal L27 protein-like 59 97 - -
Amo16g0038 335 PANTHER PNAS-3 RELATED 25 330 IPR026699 GO:0000178|GO:0003723
Amo16g0038 335 Gene3D - 103 192 IPR012340 -
Amo16g0038 335 PANTHER EXOSOME COMPLEX COMPONENT RRP4 25 330 - -
Amo16g0038 335 SMART S1_6 105 184 IPR022967 -
Amo16g0038 335 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 194 330 IPR036612 GO:0003723
Amo16g0038 335 SUPERFAMILY Nucleic acid-binding proteins 100 191 IPR012340 -
Amo16g0038 335 Pfam KH domain 194 234 IPR004088 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0038 K03679 - gmx:100776358 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0038 16 703798 706070 Amo16g0038 16 703798 706070 ECH